RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 MARCH11A6NNE9 402 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 NCR1O76036 304 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 ENDOD1O94919 500 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 ABHD16AO95870 558 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 OSMP13725 252 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 PROZP22891 400 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 GUCY2FP51841 1108 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 RNASE9P60153 205 aaKnown RBP4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 ATP8B2P98198 1209 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 TAP1Q03518 808 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 NOMO1Q15155 1222 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 TIGD2Q4W5G0 525 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 PDCD4Q53EL6 469 aaKnown RBP4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 ATXN7L2Q5T6C5 722 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 AGAP9Q5VTM2 703 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 AFMIDQ63HM1 303 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 PLXDC1Q8IUK5 500 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 VRK3Q8IV63 474 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 OR2I1PQ8NGU4 316 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 PROKR1Q8TCW9 393 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 PUS7Q96PZ0 661 aaKnown RBP4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 AGAP2Q99490 1192 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 TEX101Q9BY14 249 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 HOMER2Q9NSB8 354 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 POGKQ9P215 609 aa4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 TARBP1Q13395 1621 aaKnown RBP4.46□□□□□ -1.7
HMGB3P12-201ENST00000438745 GRID2IPA4D2P6 1211 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 KATNA1O75449 491 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 AMY1AP04745 511 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 UBXN2BQ14CS0 331 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 PTPAQ15257 358 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 RRP12Q5JTH9 1297 aaKnown RBP4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 SEM1Q6ZVN7 128 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 RHOT2Q8IXI1 618 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 RNF169Q8NCN4 708 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 C1orf162Q8NEQ5 155 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 STON2Q8WXE9 905 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 FUBP1Q96AE4 644 aaKnown RBP4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 FAM193BQ96PV7 902 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 SLC2A13Q96QE2 648 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 TTPALQ9BTX7 342 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 MRI1Q9BV20 369 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 ADI1Q9BV57 179 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 BRINP2Q9C0B6 783 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 LANCL2Q9NS86 450 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 MOCS1Q9NZB8 636 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 SLC23A1Q9UHI7 598 aa4.45□□□□□ -1.7
HMGB3P12-201ENST00000438745 DNMBPQ6XZF7 1577 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 RAD54L2Q9Y4B4 1467 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 FAM171A2A8MVW0 826 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 LPXNO60711 386 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 RAMP2O60895 175 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 GCP02774 474 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 ELANEP08246 267 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 ZEB1P37275 1124 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 CHN2P52757 468 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 PER3P56645 1201 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 KRT85P78386 507 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 ITKQ08881 620 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 SMN1Q16637 294 aaKnown RBP4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 KCNV1Q6PIU1 500 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 DRC7Q8IY82 874 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 JADE3Q92613 823 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 MTMR8Q96EF0 704 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 FAXDC2Q96IV6 333 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 SMAD5Q99717 465 aaKnown RBP4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 ADAM2Q99965 735 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 CCDC8Q9H0W5 538 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 SERHL2Q9H4I8 314 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 KLHL11Q9NVR0 708 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 SYBUQ9NX95 663 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 C11orf21Q9P2W6 132 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 PACSIN3Q9UKS6 424 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 SOGA1O94964 1423 aa4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 MED1Q15648 1581 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P12-201ENST00000438745 POLA1P09884 1462 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 PIPSLA2A3N6 862 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 FZD9O00144 591 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 PCDHGA12O60330 932 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 RHOBTB3O94955 611 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 NDUFA10O95299 355 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 POMCP01189 267 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 CFIP05156 583 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 FPR1P21462 350 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 GCSHP23434 173 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 PCSK1P29120 753 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 ALDH1A3P47895 512 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 KRTAP1-1Q07627 177 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 MTM1Q13496 603 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 BRDTQ58F21 947 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 SYDE2Q5VT97 1194 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 ARMC6Q6NXE6 501 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 MED25Q71SY5 747 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 ZGPATQ8N5A5 531 aaKnown RBP4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 FBXO18Q8NFZ0 1043 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 UHRF1Q96T88 793 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 MYOCQ99972 504 aa4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 SENP6Q9GZR1 1112 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P12-201ENST00000438745 TOR3AQ9H497 397 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms