RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 DYNLL2Q96FJ2 89 aa11.78□□□□□ -0.52
SCN4A-201ENST00000435607 CCDC189A1A4V9 331 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 SFI1A8K8P3 1242 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 GPS1Q13098 491 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 C11orf96Q7Z7L8 435 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 EMILIN2Q9BXX0 1053 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 MRPS26Q9BYN8 205 aaKnown RBP11.77□□□□□ -0.52
SCN4A-201ENST00000435607 WNT8AQ9H1J5 351 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 PDE11AQ9HCR9 933 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 ARHGEF38Q9NXL2 777 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 CD274Q9NZQ7 290 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 ZFP69BQ9UJL9 534 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 PCDHA10Q9Y5I2 948 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 FRMD3A2A2Y4 597 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 ACADSBP45954 432 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 PMS1P54277 932 aaKnown RBP11.77□□□□□ -0.52
SCN4A-201ENST00000435607 ARRDC4Q8NCT1 418 aa11.77□□□□□ -0.52
SCN4A-201ENST00000435607 L3MBTL3Q96JM7 780 aaPredicted RBP11.77□□□□□ -0.52
SCN4A-201ENST00000435607 NOVA2Q9UNW9 492 aaKnown RBP11.77□□□□□ -0.52
SCN4A-201ENST00000435607 ATP9BO43861 1147 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 EGFRP00533 1210 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 IFNAR1P17181 557 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 STAT5BP51692 787 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 CSE1LP55060 971 aaKnown RBP11.77□□□□□ -0.53
SCN4A-201ENST00000435607 KIZQ2M2Z5 673 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 NUP85Q9BW27 656 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 TMEM94Q12767 1356 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 NPY2RP49146 381 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 CDH18Q13634 790 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 CCDC142Q17RM4 750 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 RGS9BPQ6ZS82 235 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 NFKBIZQ9BYH8 718 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 CEP72Q9P209 647 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 RASSF9O75901 435 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 GGPS1O95749 300 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 VCAM1P19320 739 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 GCLMP48507 274 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 COG2Q14746 738 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 ADCK5Q3MIX3 580 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 HORMAD1Q86X24 394 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 CCDC3Q9BQI4 270 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 LSG1Q9H089 658 aaKnown RBP11.77□□□□□ -0.53
SCN4A-201ENST00000435607 USE1Q9NZ43 259 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 MAN1B1Q9UKM7 699 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 ARAP3Q8WWN8 1544 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 C6orf10Q5SRN2 563 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 FBXW10Q5XX13 1052 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 HOMEZQ8IX15 550 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 LCORLQ8N3X6 602 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 AP1M1Q9BXS5 423 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 WDR41Q9HAD4 459 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 THG1LQ9NWX6 298 aaKnown RBP11.77□□□□□ -0.53
SCN4A-201ENST00000435607 WDR35Q9P2L0 1181 aa11.77□□□□□ -0.53
SCN4A-201ENST00000435607 HEATR9A2RTY3 570 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 RRN3P2A6NIE6 340 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PSMD12O00232 456 aaPredicted RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 FOXP2O15409 715 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 TRIP4Q15650 581 aaPredicted RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 ZNF564Q8TBZ8 553 aaPredicted RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 UBE2Q2Q8WVN8 375 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 SAAL1Q96ER3 474 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 ARMC7Q9H6L4 198 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 ANKARQ7Z5J8 1434 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 NR1D1P20393 614 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 SERPINB4P48594 390 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 YME1L1Q96TA2 773 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 NLNQ9BYT8 704 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 DAB1O75553 588 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 FKBP9O95302 570 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 GSTA3Q16772 222 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 FKBP9P1Q75LS8 142 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PCYOX1LQ8NBM8 494 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 CEP70Q8NHQ1 597 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 C11orf70Q9BRQ4 267 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 USP44Q9H0E7 712 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 FLT1P17948 1338 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PTCH1Q13635 1447 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PRR23AA6NEV1 266 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 MMEP08473 750 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 MZF1P28698 734 aaPredicted RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 POLE2P56282 527 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 SKP1P63208 163 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PTH1RQ03431 593 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 CAMK2GQ13555 558 aaPredicted RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 AASDHQ4L235 1098 aaPredicted RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 IFNLR1Q8IU57 520 aaPredicted RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 CLYBLQ8N0X4 340 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 CARD9Q9H257 536 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 DIABLOQ9NR28 239 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 ZC3H7BQ9UGR2 993 aaKnown RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 UTYO14607 1347 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 TSPOAP1O95153 1857 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 TMEM2Q9UHN6 1383 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PFASO15067 1338 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 SH2B2O14492 632 aaPredicted RBP11.76□□□□□ -0.53
SCN4A-201ENST00000435607 CYTH3O43739 400 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 SLC25A27O95847 323 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 PRKCBP05771 671 aa11.76□□□□□ -0.53
SCN4A-201ENST00000435607 HMBSP08397 361 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms