RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 ESRRBO95718 433 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 EGR2P11161 476 aaPredicted RBP6.4□□□□□ -1.38
PTPN4-204ENST00000431283 GSPT1P15170 499 aaKnown RBP6.4□□□□□ -1.38
PTPN4-204ENST00000431283 SRSF2Q01130 221 aaKnown RBP6.4□□□□□ -1.38
PTPN4-204ENST00000431283 MALLQ13021 153 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 METRNLQ641Q3 311 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 ZNF529Q6P280 563 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 SYCE2Q6PIF2 218 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 RD3Q7Z3Z2 195 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 CMIPQ8IY22 773 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 FAM43AQ8N2R8 423 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 TMEM132CQ8N3T6 1108 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 NEU1Q99519 415 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 SYNPO2LQ9H987 977 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 GALNT9Q9HCQ5 603 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 DMRT3Q9NQL9 472 aa6.4□□□□□ -1.38
PTPN4-204ENST00000431283 AJAP1Q9UKB5 411 aaPredicted RBP6.4□□□□□ -1.38
PTPN4-204ENST00000431283 MTO1Q9Y2Z2 717 aaKnown RBP6.4□□□□□ -1.38
PTPN4-204ENST00000431283 SPATA31A6Q5VVP1 1343 aa6.4□□□□□ -1.39
PTPN4-204ENST00000431283 GPANK1O95872 356 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 ALAS1P13196 640 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 FBLP22087 321 aaKnown RBP6.39□□□□□ -1.39
PTPN4-204ENST00000431283 UBXN2BQ14CS0 331 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 ATP2B3Q16720 1220 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 CAGE1Q8TC20 777 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 VOPP1Q96AW1 172 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 CYFIP2Q96F07 1278 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 ORAI2Q96SN7 254 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 ZSWIM1Q9BR11 485 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 LDAHQ9H6V9 325 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 CASS4Q9NQ75 786 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 ADARB2Q9NS39 739 aaKnown RBP6.39□□□□□ -1.39
PTPN4-204ENST00000431283 ATRNL1Q5VV63 1379 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 ATAD2BQ9ULI0 1458 aa6.39□□□□□ -1.39
PTPN4-204ENST00000431283 FAM171A2A8MVW0 826 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 ERN1O75460 977 aaKnown RBP6.38□□□□□ -1.39
PTPN4-204ENST00000431283 MCAMP43121 646 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 ALDH1A3P47895 512 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 PRR16Q569H4 304 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 KCNK18Q7Z418 384 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 AMOTL1Q8IY63 956 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 AFAP1L2Q8N4X5 818 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 WDR66Q8TBY9 1149 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 DNM3Q9UQ16 869 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 DMTF1Q9Y222 760 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 WASHC2AQ641Q2 1341 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 PNPLA7Q6ZV29 1317 aa6.38□□□□□ -1.39
PTPN4-204ENST00000431283 FGFR4P22455 802 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 MASP1P48740 699 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 ELLP55199 621 aaPredicted RBP6.37□□□□□ -1.39
PTPN4-204ENST00000431283 CXADRP78310 365 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 CREMQ03060 361 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 OCA2Q04671 838 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 FOXI1Q12951 378 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 OTUD7BQ6GQQ9 843 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 SDE2Q6IQ49 451 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 CCHCR1Q8TD31 782 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 CASKIN2Q8WXE0 1202 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 Q96MF0 132 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 DUSP26Q9BV47 211 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 MANSC1Q9H8J5 431 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 KIAA1586Q9HCI6 787 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 VTA1Q9NP79 307 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 SCOCQ9UIL1 159 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 KCNE5Q9UJ90 142 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 TLK1Q9UKI8 766 aa6.37□□□□□ -1.39
PTPN4-204ENST00000431283 SMARCA2P51531 1590 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 MAST3O60307 1309 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 GPR32O75388 356 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 OSMP13725 252 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 LMO1P25800 156 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 GUCY1A2P33402 732 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 PLA2G5P39877 138 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 HSD11B2P80365 405 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 B3GNTL1Q67FW5 361 aaPredicted RBP6.36□□□□□ -1.39
PTPN4-204ENST00000431283 FBXO42Q6P3S6 717 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 GPR149Q86SP6 731 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 SPATS2Q86XZ4 545 aaKnown RBP6.36□□□□□ -1.39
PTPN4-204ENST00000431283 COLGALT2Q8IYK4 626 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 BOD1Q96IK1 185 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 BBC3Q96PG8 261 aaPredicted RBP6.36□□□□□ -1.39
PTPN4-204ENST00000431283 CCM2LQ9NUG4 571 aaPredicted RBP6.36□□□□□ -1.39
PTPN4-204ENST00000431283 LRIT1Q9P2V4 623 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 PCDHGA2Q9Y5H1 932 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 COX11Q9Y6N1 276 aa6.36□□□□□ -1.39
PTPN4-204ENST00000431283 ELANEP08246 267 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 TYRP1P17643 537 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 GCSHP23434 173 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 MPLP40238 635 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 CLK3P49761 638 aaKnown RBP6.35□□□□□ -1.39
PTPN4-204ENST00000431283 PPP3CAQ08209 521 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 MGAT2Q10469 447 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 UBE3BQ7Z3V4 1068 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPN4-204ENST00000431283 ATL2Q8NHH9 583 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 PTCD3Q96EY7 689 aaKnown RBP6.35□□□□□ -1.39
PTPN4-204ENST00000431283 C7orf25Q9BPX7 421 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 SPATA5L1Q9BVQ7 753 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 FAM30AQ9NZY2 134 aa6.35□□□□□ -1.39
PTPN4-204ENST00000431283 RUVBL1Q9Y265 456 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms