RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 SF3B1O75533 1304 aaKnown RBP eCLIP18.93■□□□□ 0.625e-6■■■■■ 82.2
CTDSP1-203ENST00000431127 TCF20Q9UGU0 1960 aaKnown RBP18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 TTC26A0AVF1 554 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 TMEM189-UBE2V1I3L0A0 370 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 PER2O15055 1255 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 PRPF6O94906 941 aaKnown RBP18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 EFEMP2O95967 443 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 URODP06132 367 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 SRGAP2BP0DMP2 458 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 GARTP22102 1010 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 KCNA5P22460 613 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 CASP1P29466 404 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 RPL9P32969 192 aaKnown RBP18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 GTF2F1P35269 517 aaKnown RBP eCLIP18.92■□□□□ 0.628e-11■■■□□ 18.7
CTDSP1-203ENST00000431127 TNFSF9P41273 254 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 ELAVL2Q12926 359 aaKnown RBP18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 KIAA1841Q6NSI8 718 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 FUT10Q6P4F1 479 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 DCLRE1AQ6PJP8 1040 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 KRBA2Q6ZNG9 492 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 GPR65Q8IYL9 337 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 RNF168Q8IYW5 571 aaPredicted RBP18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 HPS3Q969F9 1004 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 ZMAT2Q96NC0 199 aaKnown RBP18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 NECAB3Q96P71 396 aaPredicted RBP18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 PAAF1Q9BRP4 392 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 EMILIN2Q9BXX0 1053 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 FGFBP2Q9BYJ0 223 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 EXOC1Q9NV70 894 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 UBE4BO95155 1302 aa18.92■□□□□ 0.62
CTDSP1-203ENST00000431127 TISP43B9A030 160 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 F8W810 466 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 MEFVO15553 781 aaPredicted RBP18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 XPOTO43592 962 aaKnown RBP18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 B3GAT3O94766 335 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 KIF4AO95239 1232 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 LDHAP00338 332 aaKnown RBP18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 ADRB2P07550 413 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 ADSSP30520 456 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 GLUD2P49448 558 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 NDUFV1P49821 464 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 PSMD2Q13200 908 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 PTPN14Q15678 1187 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 ENOX2Q16206 610 aaKnown RBP18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 UPP1Q16831 310 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 USP41Q3LFD5 358 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 PUS10Q3MIT2 529 aaKnown RBP18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 LEXMQ3ZCV2 418 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 EPM2AIP1Q7L775 607 aaPredicted RBP18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 ZNF507Q8TCN5 953 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 RABGGTAQ92696 567 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 CCDC47Q96A33 483 aaKnown RBP18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 CACNG4Q9UBN1 327 aa18.91■□□□□ 0.62
CTDSP1-203ENST00000431127 LACTBL1A8MY62 500 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 KIAA0391O15091 583 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 TRAPPC3O43617 180 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 ACOT2P49753 483 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 CLCNKBP51801 687 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 SNRPFP62306 86 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 SOX4Q06945 474 aaPredicted RBP18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 ZBTB41Q5SVQ8 909 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 PPFIBP1Q86W92 1011 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 GLIS3Q8NEA6 775 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 AUTS2Q8WXX7 1259 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 KIF12Q96FN5 646 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 GPR62Q9BZJ7 368 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 IKZF4Q9H2S9 585 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 ASB7Q9H672 318 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 CHST7Q9NS84 486 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 UBQLN1Q9UMX0 589 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 DERAQ9Y315 318 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 BRWD1Q9NSI6 2320 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 ATG2AQ2TAZ0 1938 aa18.9■□□□□ 0.62
CTDSP1-203ENST00000431127 LINC01565O15544 149 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 KLRC4O43908 158 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 LILRB3O75022 631 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 RPN1P04843 607 aaKnown RBP18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 CYP3A5P20815 502 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 LTBRP36941 435 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 DSG1Q02413 1049 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 CREMQ03060 361 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 KIAA0319Q5VV43 1072 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 ARMCX5Q6P1M9 558 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 TMEM184AQ6ZMB5 413 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 TAS1R1Q7RTX1 841 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 FMR1NBQ8N0W7 255 aaPredicted RBP18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 HASPINQ8TF76 798 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 C18orf25Q96B23 403 aaPredicted RBP18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 FAM212AQ96EL1 285 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 GOLGA2P5Q9HBQ8 144 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 SLC39A2Q9NP94 309 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 FAM50BQ9Y247 325 aa18.89■□□□□ 0.61
CTDSP1-203ENST00000431127 CITO14578 2027 aa18.88■□□□□ 0.61
CTDSP1-203ENST00000431127 H3BQ06 376 aaPredicted RBP18.88■□□□□ 0.61
CTDSP1-203ENST00000431127 PODXLO00592 558 aa18.88■□□□□ 0.61
CTDSP1-203ENST00000431127 C2CD2LO14523 706 aa18.88■□□□□ 0.61
CTDSP1-203ENST00000431127 CLASP2O75122 1294 aaKnown RBP18.88■□□□□ 0.61
CTDSP1-203ENST00000431127 IL18RAPO95256 599 aa18.88■□□□□ 0.61
CTDSP1-203ENST00000431127 FAM160A1Q05DH4 1040 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms