RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 SPINK2P20155 84 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 CD96P40200 585 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 NOLC1Q14978 699 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB3-203ENST00000430118 DGKDQ16760 1214 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 C3orf36Q3SXR2 165 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 ANO1Q5XXA6 986 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 KANK2Q63ZY3 851 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 TMEM132EQ6IEE7 984 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 ZC3H14Q6PJT7 736 aaKnown RBP4.94□□□□□ -1.62
HMGB3-203ENST00000430118 LMBR1LQ6UX01 489 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 RPTNQ6XPR3 784 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 PROSER1Q86XN7 944 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 OR2C3Q8N628 320 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 PARD3BQ8TEW8 1205 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 ATXN2LQ8WWM7 1075 aaKnown RBP4.94□□□□□ -1.62
HMGB3-203ENST00000430118 PHKBQ93100 1093 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 DDX11Q96FC9 970 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 APIPQ96GX9 242 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 C7orf25Q9BPX7 421 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 PRDM16Q9HAZ2 1276 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 DMRT3Q9NQL9 472 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 ADGRF5Q8IZF2 1346 aa4.94□□□□□ -1.62
HMGB3-203ENST00000430118 SBF2Q86WG5 1849 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 WNK3Q9BYP7 1800 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 DDX3XO00571 662 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB3-203ENST00000430118 NPHP1O15259 732 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 FTLP02792 175 aaPredicted RBP4.93□□□□□ -1.62
HMGB3-203ENST00000430118 CHGBP05060 677 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 MYL3P08590 195 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 MYF5P13349 255 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 TRAPPC10P48553 1259 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 CCT5P48643 541 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 CASP5P51878 434 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 HK3P52790 923 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 RAB1AP62820 205 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 PRR5P85299 388 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 PFKPQ01813 784 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 DSC2Q02487 901 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 PDCD2Q16342 344 aaPredicted RBP4.93□□□□□ -1.62
HMGB3-203ENST00000430118 CR1LQ2VPA4 569 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 PLEKHN1Q494U1 663 aaPredicted RBP4.93□□□□□ -1.62
HMGB3-203ENST00000430118 TIGD5Q53EQ6 642 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 TNS2Q63HR2 1409 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 TOM1L2Q6ZVM7 507 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 DRC7Q8IY82 874 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 C16orf71Q8IYS4 520 aaPredicted RBP4.93□□□□□ -1.62
HMGB3-203ENST00000430118 CPXCR1Q8N123 301 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 NKAPQ8N5F7 415 aaKnown RBP4.93□□□□□ -1.62
HMGB3-203ENST00000430118 ANKRD42Q8N9B4 389 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 DTX3Q8N9I9 347 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 FLCNQ8NFG4 579 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 GPR156Q8NFN8 814 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 OR5AN1Q8NGI8 311 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB3-203ENST00000430118 COLEC11Q9BWP8 271 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.93□□□□□ -1.62
HMGB3-203ENST00000430118 SLC6A17Q9H1V8 727 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 MANSC1Q9H8J5 431 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 PAK6Q9NQU5 681 aaPredicted RBP4.93□□□□□ -1.62
HMGB3-203ENST00000430118 STARD7Q9NQZ5 370 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 POLR3BQ9NW08 1133 aaPredicted RBP4.93□□□□□ -1.62
HMGB3-203ENST00000430118 RTEL1Q9NZ71 1219 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 CALCOCO1Q9P1Z2 691 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 USP18Q9UMW8 372 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 ANGEL1Q9UNK9 670 aaKnown RBP4.93□□□□□ -1.62
HMGB3-203ENST00000430118 PCDHGB6Q9Y5F9 930 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 PAPPAQ13219 1627 aa4.93□□□□□ -1.62
HMGB3-203ENST00000430118 NHSQ6T4R5 1651 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 ADCY9O60503 1353 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 QSER1Q2KHR3 1735 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 ISM1B1AKI9 464 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 F5H423 210 aaPredicted RBP4.92□□□□□ -1.62
HMGB3-203ENST00000430118 PHGDHO43175 533 aaKnown RBP4.92□□□□□ -1.62
HMGB3-203ENST00000430118 FTH1P19P0C7X4 201 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 MYBP10242 640 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 GSPT1P15170 499 aaKnown RBP4.92□□□□□ -1.62
HMGB3-203ENST00000430118 HALP42357 657 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 MAP2K6P52564 334 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 YBX1P67809 324 aaKnown RBP4.92□□□□□ -1.62
HMGB3-203ENST00000430118 CDC42EP1Q00587 391 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 PPP3CAQ08209 521 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 FGL2Q14314 439 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 RAB39AQ14964 217 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 RAB3GAP1Q15042 981 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 C19orf54Q5BKX5 351 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 ZNF574Q6ZN55 896 aaPredicted RBP4.92□□□□□ -1.62
HMGB3-203ENST00000430118 GAREM2Q75VX8 874 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 TMC6Q7Z403 805 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 UNC5BQ8IZJ1 945 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 C3orf20Q8ND61 904 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 FLAD1Q8NFF5 587 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 BRI3BPQ8WY22 251 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 CYFIP2Q96F07 1278 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 C22orf23Q9BZE7 217 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 UNKQ9C0B0 810 aaKnown RBP4.92□□□□□ -1.62
HMGB3-203ENST00000430118 SLC39A2Q9NP94 309 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB3-203ENST00000430118 PGAP2Q9UHJ9 254 aa4.92□□□□□ -1.62
HMGB3-203ENST00000430118 TPCN1Q9ULQ1 816 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms