RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 DZANK1Q9NVP4 752 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 SCN1AP35498 2009 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 GADD45BO75293 160 aaPredicted RBP18.55■□□□□ 0.56
UBE3D-204ENST00000430071 NR1I2O75469 434 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 RFPL2O75678 378 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 HARSP12081 509 aaKnown RBP18.55■□□□□ 0.56
UBE3D-204ENST00000430071 PLS3P13797 630 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 PROZP22891 400 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 NDUFA8P51970 172 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 ZXDAP98168 799 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 USP41Q3LFD5 358 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 ZNF568Q3ZCX4 644 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 ALKAL1Q6UXT8 129 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 PPFIBP1Q86W92 1011 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 GPBP1Q86WP2 473 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 C3orf58Q8NDZ4 430 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 EDAQ92838 391 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 ZMAT2Q96NC0 199 aaKnown RBP18.55■□□□□ 0.56
UBE3D-204ENST00000430071 MRPL4Q9BYD3 311 aaKnown RBP18.55■□□□□ 0.56
UBE3D-204ENST00000430071 SMOC2Q9H3U7 446 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 SMIM28A0A1B0GU29 152 aa18.54■□□□□ 0.56
UBE3D-204ENST00000430071 ADAM12O43184 909 aa18.54■□□□□ 0.56
UBE3D-204ENST00000430071 MAPTP10636 758 aaKnown RBP18.54■□□□□ 0.56
UBE3D-204ENST00000430071 GRM5P41594 1212 aa18.54■□□□□ 0.56
UBE3D-204ENST00000430071 MTHFRP42898 656 aa18.54■□□□□ 0.56
UBE3D-204ENST00000430071 CLCNKBP51801 687 aa18.54■□□□□ 0.56
UBE3D-204ENST00000430071 FAM171A1Q5VUB5 890 aa18.54■□□□□ 0.56
UBE3D-204ENST00000430071 GPR149Q86SP6 731 aa18.54■□□□□ 0.56
UBE3D-204ENST00000430071 CEP57Q86XR8 500 aa18.54■□□□□ 0.56
UBE3D-204ENST00000430071 IQUBQ8NA54 791 aa18.54■□□□□ 0.56
UBE3D-204ENST00000430071 SPIRE2Q8WWL2 714 aa18.54■□□□□ 0.56
UBE3D-204ENST00000430071 REEP2Q9BRK0 252 aa18.54■□□□□ 0.56
UBE3D-204ENST00000430071 GOLGA6L4A6NEF3 574 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 I3L4J1 428 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 ASGR2P07307 311 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 ADH1AP07327 375 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 XKR4Q5GH76 650 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 ATAT1Q5SQI0 421 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 LILRA6Q6PI73 481 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 SV2BQ7L1I2 683 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 STAMQ92783 540 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 RIPOR3Q96MK2 946 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 CUEDC2Q9H467 287 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 SFXN1Q9H9B4 322 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 C17orf75Q9HAS0 396 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 KCND2Q9NZV8 630 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 STK39Q9UEW8 545 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 SERTAD1Q9UHV2 236 aa18.53■□□□□ 0.56
UBE3D-204ENST00000430071 MYMKA6NI61 221 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 TGM5O43548 720 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 ACTN4O43707 911 aaKnown RBP18.52■□□□□ 0.55
UBE3D-204ENST00000430071 GLUD1P00367 558 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 BRCC3P46736 316 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 NCKAP1LP55160 1127 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 MPZL3Q6UWV2 235 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 TRIM67Q6ZTA4 783 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 LNX1Q8TBB1 728 aaPredicted RBP18.52■□□□□ 0.55
UBE3D-204ENST00000430071 C18orf25Q96B23 403 aaPredicted RBP18.52■□□□□ 0.55
UBE3D-204ENST00000430071 SNX27Q96L92 541 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 NECTIN4Q96NY8 510 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 CLSTN3Q9BQT9 956 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 TCHPQ9BT92 498 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 TIPINQ9BVW5 301 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 KBTBD4Q9NVX7 518 aa18.52■□□□□ 0.55
UBE3D-204ENST00000430071 SF3B1O75533 1304 aaKnown RBP eCLIP18.51■□□□□ 0.553e-6■■■■■ 124.8
UBE3D-204ENST00000430071 CCDC195A0A1B0GUA6 201 aa18.51■□□□□ 0.55
UBE3D-204ENST00000430071 SPDYE4A6NLX3 237 aa18.51■□□□□ 0.55
UBE3D-204ENST00000430071 N4BP1O75113 896 aaKnown RBP18.51■□□□□ 0.55
UBE3D-204ENST00000430071 MCF2P10911 925 aa18.51■□□□□ 0.55
UBE3D-204ENST00000430071 SYKP43405 635 aa18.51■□□□□ 0.55
UBE3D-204ENST00000430071 PTPN21Q16825 1174 aa18.51■□□□□ 0.55
UBE3D-204ENST00000430071 RSPO2Q6UXX9 243 aaPredicted RBP18.51■□□□□ 0.55
UBE3D-204ENST00000430071 HAUS6Q7Z4H7 955 aa18.51■□□□□ 0.55
UBE3D-204ENST00000430071 ZNF707Q96C28 371 aaPredicted RBP18.51■□□□□ 0.55
UBE3D-204ENST00000430071 FIZ1Q96SL8 496 aa18.51■□□□□ 0.55
UBE3D-204ENST00000430071 CCDC94Q9BW85 323 aaPredicted RBP18.51■□□□□ 0.55
UBE3D-204ENST00000430071 FNIP2Q9P278 1114 aa18.51■□□□□ 0.55
UBE3D-204ENST00000430071 ANKFY1Q9P2R3 1169 aa18.51■□□□□ 0.55
UBE3D-204ENST00000430071 LIMD1Q9UGP4 676 aa18.51■□□□□ 0.55
UBE3D-204ENST00000430071 SSX2IPQ9Y2D8 614 aa18.51■□□□□ 0.55
UBE3D-204ENST00000430071 TMEM221A6NGB7 291 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 M0R296 226 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 PRPF40AO75400 957 aaKnown RBP18.5■□□□□ 0.55
UBE3D-204ENST00000430071 SLFN14P0C7P3 912 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 SPAG1Q07617 926 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 PSMD5Q16401 504 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 UPP1Q16831 310 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 SLC10A6Q3KNW5 377 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 ZBTB41Q5SVQ8 909 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 DYMQ7RTS9 669 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 FMR1NBQ8N0W7 255 aaPredicted RBP18.5■□□□□ 0.55
UBE3D-204ENST00000430071 ENGASEQ8NFI3 743 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 PIK3R5Q8WYR1 880 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 DDX12PQ92771 950 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 DNAJC19Q96DA6 116 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 ACAP3Q96P50 834 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 PYM1Q9BRP8 204 aaKnown RBP18.5■□□□□ 0.55
UBE3D-204ENST00000430071 TTPALQ9BTX7 342 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 TNMDQ9H2S6 317 aa18.5■□□□□ 0.55
UBE3D-204ENST00000430071 IKZF4Q9H2S9 585 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms