RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 GTF2H1P32780 548 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 PTGIRP43119 386 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 MAGOHP61326 146 aaKnown RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 IFT88Q13099 833 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 ITIH4Q14624 930 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 ERMARDQ5T6L9 678 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 NBPF12Q5TAG4 269 aaPredicted RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 PHLDB3Q6NSJ2 640 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 PADI6Q6TGC4 694 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 CEP128Q6ZU80 1094 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 TRMT10CQ7L0Y3 403 aaKnown RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 TAOK1Q7L7X3 1001 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 MIER3Q7Z3K6 550 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 CCDC91Q7Z6B0 441 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 CPLX4Q7Z7G2 160 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 MCF2L2Q86YR7 1114 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 C12orf50Q8NA57 414 aaPredicted RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 CYP2W1Q8TAV3 490 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 RAPGEF5Q92565 580 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 SLCO2A1Q92959 643 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 TATDN2Q93075 761 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 MAGOHBQ96A72 148 aaKnown RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 CHMP6Q96FZ7 201 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 SEC16BQ96JE7 1060 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 UIMC1Q96RL1 719 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 LXNQ9BS40 222 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 HTATIP2Q9BUP3 242 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 DPH5Q9H2P9 285 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 UNC45AQ9H3U1 944 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 GOLPH3Q9H4A6 298 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 CCDC134Q9H6E4 229 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 UBE2TQ9NPD8 197 aaPredicted RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 SEPT11Q9NVA2 429 aaKnown RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 DDX20Q9UHI6 824 aaKnown RBP9.33□□□□□ -0.92
GABPB1-205ENST00000429662 KCNG1Q9UIX4 513 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 ATP8A1Q9Y2Q0 1164 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 NR2E3Q9Y5X4 410 aa9.33□□□□□ -0.92
GABPB1-205ENST00000429662 RPTORQ8N122 1335 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 PIEZO1Q92508 2521 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 LTBP2Q14767 1821 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 K7ENM7 598 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 IPO5O00410 1097 aaKnown RBP9.32□□□□□ -0.92
GABPB1-205ENST00000429662 RGS16O15492 202 aaPredicted RBP9.32□□□□□ -0.92
GABPB1-205ENST00000429662 CHMP2AO43633 222 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 CYP1A2P05177 515 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 GSTA1P08263 222 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 TRIM49P0CI25 452 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 TRIM49CP0CI26 452 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 MMP13P45452 471 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 SEC24CP53992 1094 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 SNAP25P60880 206 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 GTF2BQ00403 316 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 GHRHRQ02643 423 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 CAV1Q03135 178 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 RASA3Q14644 834 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 TAF1CQ15572 869 aaPredicted RBP9.32□□□□□ -0.92
GABPB1-205ENST00000429662 ARHGAP44Q17R89 818 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 DCAF12L1Q5VU92 463 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 FKBP1CQ5VVH2 108 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 SMYD5Q6GMV2 418 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 PPP1R2P3Q6NXS1 205 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 ENOSF1Q7L5Y1 443 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 FAM71AQ8IYT1 594 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 RPUSD2Q8IZ73 545 aaKnown RBP9.32□□□□□ -0.92
GABPB1-205ENST00000429662 OR2W6PQ8NHA6 318 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 MAGEC3Q8TD91 643 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 FAM151AQ8WW52 585 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 DHX38Q92620 1227 aaKnown RBP9.32□□□□□ -0.92
GABPB1-205ENST00000429662 OPTNQ96CV9 577 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 ARHGEF26Q96DR7 871 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 HOOK2Q96ED9 719 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 TRIM11Q96F44 468 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 CCDC114Q96M63 670 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 XPO6Q96QU8 1125 aaKnown RBP9.32□□□□□ -0.92
GABPB1-205ENST00000429662 CELF4Q9BZC1 486 aaKnown RBP9.32□□□□□ -0.92
GABPB1-205ENST00000429662 HOMER3Q9NSC5 361 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 TBC1D22BQ9NU19 505 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 GTF3C4Q9UKN8 822 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 PCDHA3Q9Y5H8 950 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 EMSYQ7Z589 1322 aa9.32□□□□□ -0.92
GABPB1-205ENST00000429662 A0A1W2PRG0 241 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 FAM196BA6NMK8 535 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 CHUKO15111 745 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 DKC1O60832 514 aaKnown RBP eCLIP9.31□□□□□ -0.92
GABPB1-205ENST00000429662 ZC3H11AO75152 810 aaKnown RBP eCLIP9.31□□□□□ -0.92
GABPB1-205ENST00000429662 RGS20O76081 388 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 MYBL1P10243 752 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 DRD4P21917 467 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 SCP2P22307 547 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 FLT3P36888 993 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 COILP38432 576 aaPredicted RBP9.31□□□□□ -0.92
GABPB1-205ENST00000429662 PLA2G5P39877 138 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 SLC1A1P43005 524 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 MXI1P50539 228 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 PEX5P50542 639 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 HSD17B4P51659 736 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 MNAT1P51948 309 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 CACNB3P54284 484 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 RWDD2BP57060 319 aa9.31□□□□□ -0.92
GABPB1-205ENST00000429662 CALCOCO2Q13137 446 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms