RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 STK24Q9Y6E0 443 aa16.03■□□□□ 0.16
SCAP-206ENST00000428413 BCL9LQ86UU0 1499 aa16.03■□□□□ 0.16
SCAP-206ENST00000428413 IRX1P78414 480 aaPredicted RBP16.03■□□□□ 0.16
SCAP-206ENST00000428413 PPP6R3Q5H9R7 873 aaPredicted RBP16.03■□□□□ 0.16
SCAP-206ENST00000428413 ZBTB41Q5SVQ8 909 aa16.03■□□□□ 0.16
SCAP-206ENST00000428413 DNAJC24Q6P3W2 148 aa16.03■□□□□ 0.16
SCAP-206ENST00000428413 SLC13A5Q86YT5 568 aaPredicted RBP16.03■□□□□ 0.16
SCAP-206ENST00000428413 ZBED8Q8IZ13 594 aa16.03■□□□□ 0.16
SCAP-206ENST00000428413 TMEM130Q8N3G9 435 aa16.03■□□□□ 0.16
SCAP-206ENST00000428413 FLAD1Q8NFF5 587 aa16.03■□□□□ 0.16
SCAP-206ENST00000428413 RSAD2Q8WXG1 361 aa16.03■□□□□ 0.16
SCAP-206ENST00000428413 ZSWIM1Q9BR11 485 aa16.03■□□□□ 0.16
SCAP-206ENST00000428413 SLITRK6Q9H5Y7 841 aa16.03■□□□□ 0.16
SCAP-206ENST00000428413 JPH1Q9HDC5 661 aaPredicted RBP16.03■□□□□ 0.16
SCAP-206ENST00000428413 SYNGAP1Q96PV0 1343 aa16.02■□□□□ 0.16
SCAP-206ENST00000428413 GCLCP48506 637 aaPredicted RBP16.02■□□□□ 0.16
SCAP-206ENST00000428413 NLRP11P59045 1033 aaKnown RBP16.02■□□□□ 0.16
SCAP-206ENST00000428413 MRPS9P82933 396 aaKnown RBP16.02■□□□□ 0.16
SCAP-206ENST00000428413 FAXCQ5TGI0 409 aa16.02■□□□□ 0.16
SCAP-206ENST00000428413 NETO2Q8NC67 525 aa16.02■□□□□ 0.16
SCAP-206ENST00000428413 OTUD5Q96G74 571 aa16.02■□□□□ 0.16
SCAP-206ENST00000428413 PDCD2LQ9BRP1 358 aa16.02■□□□□ 0.16
SCAP-206ENST00000428413 IQCGQ9H095 443 aaKnown RBP16.02■□□□□ 0.16
SCAP-206ENST00000428413 PRM3Q9NNZ6 103 aa16.02■□□□□ 0.16
SCAP-206ENST00000428413 TBC1D22BQ9NU19 505 aa16.02■□□□□ 0.16
SCAP-206ENST00000428413 SEL1LQ9UBV2 794 aa16.02■□□□□ 0.16
SCAP-206ENST00000428413 ZNRF3Q9ULT6 936 aa16.02■□□□□ 0.16
SCAP-206ENST00000428413 CCND2P30279 289 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 YWHAGP61981 247 aaKnown RBP eCLIP16.02■□□□□ 0.15
SCAP-206ENST00000428413 P3H1Q32P28 736 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 IZUMO3Q5VZ72 239 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 PALM2Q8IXS6 379 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 PRELID2Q8N945 189 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 KLHL29Q96CT2 875 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 CHMP6Q96FZ7 201 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 KREMEN1Q96MU8 473 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 GINM1Q9NU53 330 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 HACL1Q9UJ83 578 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 MAD1L1Q9Y6D9 718 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 KAT6AQ92794 2004 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 TMEM120BA0PK00 339 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 PSAPP07602 524 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 RAP1GAPP47736 663 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 GMPSP49915 693 aaPredicted RBP16.02■□□□□ 0.15
SCAP-206ENST00000428413 TNFAIP1Q13829 316 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 WDR72Q3MJ13 1102 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 TATDN1Q6P1N9 297 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 PPP1R14CQ8TAE6 165 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 EPS8L1Q8TE68 723 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 KAT2BQ92831 832 aa16.02■□□□□ 0.15
SCAP-206ENST00000428413 NGRNQ9NPE2 291 aaKnown RBP16.02■□□□□ 0.15
SCAP-206ENST00000428413 DDX20Q9UHI6 824 aaKnown RBP16.02■□□□□ 0.15
SCAP-206ENST00000428413 MYH3P11055 1940 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 ITGB4P16144 1822 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 PKD1L3Q7Z443 1732 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 DOT1LQ8TEK3 1739 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 CYP3A7-CYP3A51PA0A087WV96 503 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 CFHP08603 1231 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 COILP38432 576 aaPredicted RBP16.01■□□□□ 0.15
SCAP-206ENST00000428413 RGS7P49802 495 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 GPD1LQ8N335 351 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 ACTRT1Q8TDG2 376 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 CAVIN3Q969G5 261 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 XPO6Q96QU8 1125 aaKnown RBP16.01■□□□□ 0.15
SCAP-206ENST00000428413 SLC9A2Q9UBY0 812 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 ATP2A1O14983 1001 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 VIL1P09327 827 aaKnown RBP16.01■□□□□ 0.15
SCAP-206ENST00000428413 CDH8P55286 799 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 MXRA7P84157 204 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 C15orf52Q6ZUT6 534 aaKnown RBP16.01■□□□□ 0.15
SCAP-206ENST00000428413 RFX6Q8HWS3 928 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 C1orf131Q8NDD1 294 aaKnown RBP16.01■□□□□ 0.15
SCAP-206ENST00000428413 GMCL1P1Q8NEA9 526 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 BSNDQ8WZ55 320 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 AGO4Q9HCK5 861 aaKnown RBP16.01■□□□□ 0.15
SCAP-206ENST00000428413 SH3BP1Q9Y3L3 701 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 H7C0C1 242 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 PHF2O75151 1096 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 CCNE2O96020 404 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 ICAM1P05362 532 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 ATP5OP48047 213 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 HIRAP54198 1017 aaPredicted RBP16.01■□□□□ 0.15
SCAP-206ENST00000428413 NSUN6Q8TEA1 469 aaKnown RBP16.01■□□□□ 0.15
SCAP-206ENST00000428413 FBF1Q8TES7 1133 aa16.01■□□□□ 0.15
SCAP-206ENST00000428413 FAM49AQ9H0Q0 323 aaPredicted RBP16.01■□□□□ 0.15
SCAP-206ENST00000428413 CDC42EP4Q9H3Q1 356 aaKnown RBP16.01■□□□□ 0.15
SCAP-206ENST00000428413 LAMB4A4D0S4 1761 aa16■□□□□ 0.15
SCAP-206ENST00000428413 CHRNA3P32297 505 aa16■□□□□ 0.15
SCAP-206ENST00000428413 GTF2H1P32780 548 aa16■□□□□ 0.15
SCAP-206ENST00000428413 ARSEP51690 589 aa16■□□□□ 0.15
SCAP-206ENST00000428413 ACTR2P61160 394 aa16■□□□□ 0.15
SCAP-206ENST00000428413 IFRD2Q12894 506 aaPredicted RBP16■□□□□ 0.15
SCAP-206ENST00000428413 CCDC6Q16204 474 aa16■□□□□ 0.15
SCAP-206ENST00000428413 TTC27Q6P3X3 843 aa16■□□□□ 0.15
SCAP-206ENST00000428413 CCDC60Q8IWA6 550 aaPredicted RBP16■□□□□ 0.15
SCAP-206ENST00000428413 PLEKHO2Q8TD55 490 aa16■□□□□ 0.15
SCAP-206ENST00000428413 ATP6V0A4Q9HBG4 840 aa16■□□□□ 0.15
SCAP-206ENST00000428413 AKT3Q9Y243 479 aa16■□□□□ 0.15
SCAP-206ENST00000428413 SKAP2O75563 359 aaPredicted RBP16■□□□□ 0.15
SCAP-206ENST00000428413 FAM107AO95990 144 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms