RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 PRPF4O43172 522 aaKnown RBP eCLIP10.29□□□□□ -0.76
SNX13-203ENST00000428135 ENDOD1O94919 500 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 CHEK2O96017 543 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 CSE1LP55060 971 aaKnown RBP10.29□□□□□ -0.76
SNX13-203ENST00000428135 ACTR2P61160 394 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 LRRC14Q15048 493 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 TRIM59Q8IWR1 403 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 SH3TC2Q8TF17 1288 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 CHP1Q99653 195 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 TMEM117Q9H0C3 514 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 RNF19AQ9NV58 838 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 PARVAQ9NVD7 372 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 MAP2P11137 1827 aaKnown RBP10.29□□□□□ -0.76
SNX13-203ENST00000428135 PFASO15067 1338 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 CNTNAP5Q8WYK1 1306 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 C17orf102A2RUQ5 167 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 ZC3H11AO75152 810 aaKnown RBP eCLIP10.29□□□□□ -0.76
SNX13-203ENST00000428135 KRT14P02533 472 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 CYBBP04839 570 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 PDGFRAP16234 1089 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 FGFR4P22455 802 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 CPT1AP50416 773 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 ERFP50548 548 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 DCAF6Q58WW2 860 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 SENP7Q9BQF6 1050 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 SMYD3Q9H7B4 428 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 SPECC1L-ADORA2AF8WAN1 911 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 H3BRJ5 948 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 KIF3CO14782 793 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 ANP32DO95626 131 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 SLC25A27O95847 323 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 BRD2P25440 801 aaKnown RBP10.29□□□□□ -0.76
SNX13-203ENST00000428135 KPNA2P52292 529 aaKnown RBP10.29□□□□□ -0.76
SNX13-203ENST00000428135 EIF3EP60228 445 aaKnown RBP10.29□□□□□ -0.76
SNX13-203ENST00000428135 E2F5Q15329 346 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 CATSPER3Q86XQ3 398 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 UPF1Q92900 1129 aaKnown RBP eCLIP10.29□□□□□ -0.76
SNX13-203ENST00000428135 C18orf8Q96DM3 657 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 COG4Q9H9E3 785 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 ANLNQ9NQW6 1124 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 AGPAT5Q9NUQ2 364 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 ZDHHC9Q9Y397 364 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 PDHXO00330 501 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 APOL1O14791 398 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 NFKBIAP25963 317 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 WEE1P30291 646 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 RFX5P48382 616 aaPredicted RBP10.29□□□□□ -0.76
SNX13-203ENST00000428135 CASP4P49662 377 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 ARSEP51690 589 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 ADGRA1Q86SQ6 560 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 GPC2Q8N158 579 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 RBBP8NLQ8NC74 664 aaPredicted RBP10.29□□□□□ -0.76
SNX13-203ENST00000428135 SMARCAL1Q9NZC9 954 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 DCTN4Q9UJW0 460 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 CEMIPQ8WUJ3 1361 aa10.29□□□□□ -0.76
SNX13-203ENST00000428135 SYNGAP1Q96PV0 1343 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 NFIBO00712 420 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 ARP10275 920 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 SLC9A1P19634 815 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 SOX11P35716 441 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 LY6KQ17RY6 165 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 ADCK2Q7Z695 626 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNX13-203ENST00000428135 ELAC2Q9BQ52 826 aaKnown RBP10.28□□□□□ -0.76
SNX13-203ENST00000428135 MTIF3Q9H2K0 278 aaKnown RBP10.28□□□□□ -0.76
SNX13-203ENST00000428135 NAGPAQ9UK23 515 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 TFR2Q9UP52 801 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
SNX13-203ENST00000428135 ALDH1A1P00352 501 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 TAC1P20366 129 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 GOLGA7BQ2TAP0 167 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 CLMNQ96JQ2 1002 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 ITM2BQ9Y287 266 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 SH3BP1Q9Y3L3 701 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 HSPA6P17066 643 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 NOP14P78316 857 aaKnown RBP10.28□□□□□ -0.76
SNX13-203ENST00000428135 FASTKD1Q53R41 847 aaKnown RBP10.28□□□□□ -0.76
SNX13-203ENST00000428135 MAP3K21Q5TCX8 1036 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 OSBPL9Q96SU4 736 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 IRX2Q9BZI1 471 aaPredicted RBP10.28□□□□□ -0.76
SNX13-203ENST00000428135 GOLPH3Q9H4A6 298 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 SFMBT1Q9UHJ3 866 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 USP20Q9Y2K6 914 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 SLIT1O75093 1534 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 FAM47DPA6NHR8 397 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 ATP1A1P05023 1023 aaKnown RBP10.28□□□□□ -0.76
SNX13-203ENST00000428135 ALDH7A1P49419 539 aaKnown RBP10.28□□□□□ -0.76
SNX13-203ENST00000428135 CLCN6P51797 869 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 TWF1Q12792 350 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 CASP8Q14790 479 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 C10orf120Q5SQS8 335 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 PHLDB3Q6NSJ2 640 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 CCDC137Q6PK04 289 aaKnown RBP10.28□□□□□ -0.76
SNX13-203ENST00000428135 RFWD2Q8NHY2 731 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 CDCA5Q96FF9 252 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 HPS4Q9NQG7 708 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 LIMA1Q9UHB6 759 aaKnown RBP10.28□□□□□ -0.76
SNX13-203ENST00000428135 HLA-DRAP01903 254 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 ST8SIA6P61647 398 aa10.28□□□□□ -0.76
SNX13-203ENST00000428135 DEFB115Q30KQ5 88 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms