RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 BICD1Q96G01 975 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 MFSD14AQ96MC6 490 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 UROC1Q96N76 676 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 ACAP3Q96P50 834 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 CLSTN3Q9BQT9 956 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 DAXXQ9UER7 740 aaPredicted RBP20.14■□□□□ 0.81
PSPC1-202ENST00000427943 LIMD1Q9UGP4 676 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 USTQ9Y2C2 406 aa20.14■□□□□ 0.81
PSPC1-202ENST00000427943 CLUHO75153 1309 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 K7ENM7 598 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 ADAM12O43184 909 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 FAM13AO94988 1023 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 KRT18P05783 430 aaKnown RBP20.13■□□□□ 0.81
PSPC1-202ENST00000427943 BRCC3P46736 316 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 MTMR3Q13615 1198 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 UPP1Q16831 310 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 DCLRE1AQ6PJP8 1040 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 CD300LGQ6UXG3 332 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.13■□□□□ 0.81
PSPC1-202ENST00000427943 HAUS6Q7Z4H7 955 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 BMP8AQ7Z5Y6 402 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 PLCD3Q8N3E9 789 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 HDAC7Q8WUI4 952 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 LARP4BQ92615 738 aaKnown RBP20.13■□□□□ 0.81
PSPC1-202ENST00000427943 ZNF707Q96C28 371 aaPredicted RBP20.13■□□□□ 0.81
PSPC1-202ENST00000427943 ACSF2Q96CM8 615 aaPredicted RBP20.13■□□□□ 0.81
PSPC1-202ENST00000427943 EPSTI1Q96J88 318 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 HAPLN2Q9GZV7 340 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 ZHX3Q9H4I2 956 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 PLEKHA4Q9H4M7 779 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 KCNG1Q9UIX4 513 aa20.13■□□□□ 0.81
PSPC1-202ENST00000427943 ARIH1Q9Y4X5 557 aaPredicted RBP20.13■□□□□ 0.81
PSPC1-202ENST00000427943 WDFY4Q6ZS81 3184 aa20.12■□□□□ 0.81
PSPC1-202ENST00000427943 TKTP29401 623 aaKnown RBP20.12■□□□□ 0.81
PSPC1-202ENST00000427943 ZPBP2Q6X784 338 aa20.12■□□□□ 0.81
PSPC1-202ENST00000427943 OTOP3Q7RTS5 596 aa20.12■□□□□ 0.81
PSPC1-202ENST00000427943 MYCT1Q8N699 235 aa20.12■□□□□ 0.81
PSPC1-202ENST00000427943 C18orf25Q96B23 403 aaPredicted RBP20.12■□□□□ 0.81
PSPC1-202ENST00000427943 INTS4Q96HW7 963 aaKnown RBP20.12■□□□□ 0.81
PSPC1-202ENST00000427943 CCSER1Q9C0I3 900 aa20.12■□□□□ 0.81
PSPC1-202ENST00000427943 PIDD1Q9HB75 910 aa20.12■□□□□ 0.81
PSPC1-202ENST00000427943 SLC38A7Q9NVC3 462 aa20.12■□□□□ 0.81
PSPC1-202ENST00000427943 ZDHHC7Q9NXF8 308 aa20.12■□□□□ 0.81
PSPC1-202ENST00000427943 CNTN3Q9P232 1028 aa20.12■□□□□ 0.81
PSPC1-202ENST00000427943 FBXO2Q9UK22 296 aaPredicted RBP20.12■□□□□ 0.81
PSPC1-202ENST00000427943 FBXW11Q9UKB1 542 aa20.12■□□□□ 0.81
PSPC1-202ENST00000427943 MTMR6Q9Y217 621 aa20.12■□□□□ 0.81
PSPC1-202ENST00000427943 ZDBF2Q9HCK1 2354 aa20.11■□□□□ 0.81
PSPC1-202ENST00000427943 H0YCG3 227 aa20.11■□□□□ 0.81
PSPC1-202ENST00000427943 PODXLO00592 558 aa20.11■□□□□ 0.81
PSPC1-202ENST00000427943 CLDN3O15551 220 aa20.11■□□□□ 0.81
PSPC1-202ENST00000427943 N4BP1O75113 896 aaKnown RBP20.11■□□□□ 0.81
PSPC1-202ENST00000427943 ZMYND10O75800 440 aa20.11■□□□□ 0.81
PSPC1-202ENST00000427943 KCNE1P15382 129 aa20.11■□□□□ 0.81
PSPC1-202ENST00000427943 FGFR3P22607 806 aa20.11■□□□□ 0.81
PSPC1-202ENST00000427943 MCL1Q07820 350 aa20.11■□□□□ 0.81
PSPC1-202ENST00000427943 SLC10A6Q3KNW5 377 aa20.11■□□□□ 0.81
PSPC1-202ENST00000427943 SUGP1Q8IWZ8 645 aaKnown RBP20.11■□□□□ 0.81
PSPC1-202ENST00000427943 DDX27Q96GQ7 796 aaKnown RBP20.11■□□□□ 0.81
PSPC1-202ENST00000427943 CLIC6Q96NY7 704 aa20.11■□□□□ 0.81
PSPC1-202ENST00000427943 PARVGQ9HBI0 331 aa20.11■□□□□ 0.81
PSPC1-202ENST00000427943 WDR6Q9NNW5 1121 aaKnown RBP20.11■□□□□ 0.81
PSPC1-202ENST00000427943 TBCAO75347 108 aaKnown RBP20.1■□□□□ 0.81
PSPC1-202ENST00000427943 C1RP00736 705 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 PDGFBP01127 241 aaPredicted RBP20.1■□□□□ 0.81
PSPC1-202ENST00000427943 CXCL8P10145 99 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 GBP2P32456 591 aaPredicted RBP20.1■□□□□ 0.81
PSPC1-202ENST00000427943 LIG4P49917 911 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 ZNF131P52739 623 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 LIN9Q5TKA1 542 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 PDXDC1Q6P996 788 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 CYP26C1Q6V0L0 522 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 TMEM130Q8N3G9 435 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 FBXL6Q8N531 539 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 PRKD2Q9BZL6 878 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 MTRRQ9UBK8 725 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 TBX20Q9UMR3 447 aa20.1■□□□□ 0.81
PSPC1-202ENST00000427943 NOTCH4Q99466 2003 aa20.09■□□□□ 0.81
PSPC1-202ENST00000427943 HNRNPDLO14979 420 aaKnown RBP20.09■□□□□ 0.81
PSPC1-202ENST00000427943 TRAK2O60296 914 aa20.09■□□□□ 0.81
PSPC1-202ENST00000427943 C8AP07357 584 aa20.09■□□□□ 0.81
PSPC1-202ENST00000427943 NMT1P30419 496 aaKnown RBP20.09■□□□□ 0.81
PSPC1-202ENST00000427943 OR1D2P34982 312 aa20.09■□□□□ 0.81
PSPC1-202ENST00000427943 TNFSF9P41273 254 aa20.09■□□□□ 0.81
PSPC1-202ENST00000427943 SPAG1Q07617 926 aa20.09■□□□□ 0.81
PSPC1-202ENST00000427943 RSPO2Q6UXX9 243 aaPredicted RBP20.09■□□□□ 0.81
PSPC1-202ENST00000427943 GET4Q7L5D6 327 aaPredicted RBP20.09■□□□□ 0.81
PSPC1-202ENST00000427943 UBALD2Q8IYN6 164 aa20.09■□□□□ 0.81
PSPC1-202ENST00000427943 USP28Q96RU2 1077 aa20.09■□□□□ 0.81
PSPC1-202ENST00000427943 RHOBTB2Q9BYZ6 727 aa20.09■□□□□ 0.81
PSPC1-202ENST00000427943 TUBGCP4Q9UGJ1 667 aa20.09■□□□□ 0.81
PSPC1-202ENST00000427943 SRPRBQ9Y5M8 271 aaKnown RBP20.09■□□□□ 0.81
PSPC1-202ENST00000427943 CDY1Q9Y6F8 540 aa20.09■□□□□ 0.81
PSPC1-202ENST00000427943 TCHHQ07283 1943 aa20.08■□□□□ 0.81
PSPC1-202ENST00000427943 TRAPPC3O43617 180 aa20.08■□□□□ 0.81
PSPC1-202ENST00000427943 STX6O43752 255 aa20.08■□□□□ 0.81
PSPC1-202ENST00000427943 PAPLNO95428 1278 aa20.08■□□□□ 0.81
PSPC1-202ENST00000427943 ZBTB41Q5SVQ8 909 aa20.08■□□□□ 0.81
PSPC1-202ENST00000427943 STAMQ92783 540 aa20.08■□□□□ 0.81
PSPC1-202ENST00000427943 MYADMQ96S97 322 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms