RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 MYOCDQ8IZQ8 938 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 ADSSL1Q8N142 457 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 TMEM130Q8N3G9 435 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 CEP120Q8N960 986 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 RNF169Q8NCN4 708 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 RNPC3Q96LT9 517 aaKnown RBP6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 MED15Q96RN5 788 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 CBWD1Q9BRT8 395 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 APOL6Q9BWW8 343 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 FTHL17Q9BXU8 183 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 KCTD10Q9H3F6 313 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 SEMA6BQ9H3T3 888 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 NXF3Q9H4D5 531 aaKnown RBP6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 PCIF1Q9H4Z3 704 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 CHST12Q9NRB3 414 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 FAM105AQ9NUU6 356 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 ANKFY1Q9P2R3 1169 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 HOOK1Q9UJC3 728 aaKnown RBP6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 CDV3Q9UKY7 258 aaKnown RBP6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 IPPQ9Y573 584 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 STYXL1Q9Y6J8 313 aa6.25□□□□□ -1.41
HERPUD2-204ENST00000426180 COL4A6Q14031 1691 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 A0A0U1RQF3 1178 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 SLC35F4A4IF30 521 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 GOLGA8IPA6NC78 632 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 TRIM49BA6NDI0 452 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 GOLGA8JA6NMD2 632 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 HNRNPDLO14979 420 aaKnown RBP6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 B4GALT3O60512 393 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 TOM1L1O75674 476 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 AMHP03971 560 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 MCF2P10911 925 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 ACTN1P12814 892 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 ATP2A2P16615 1042 aaKnown RBP6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 TNFSF9P41273 254 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 KCNJ6P48051 423 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 PMS1P54277 932 aaKnown RBP6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 MCL1Q07820 350 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 ALCAMQ13740 583 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 NOLC1Q14978 699 aaKnown RBP eCLIP6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 PCBP1Q15365 356 aaKnown RBP eCLIP6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 KNOP1Q1ED39 458 aaKnown RBP6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 ZNF568Q3ZCX4 644 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 ZCWPW2Q504Y3 356 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 CLLU1OSQ5K130 101 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 ANKRD40Q6AI12 368 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 CRELD2Q6UXH1 353 aaPredicted RBP6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 ZPBP2Q6X784 338 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 SLC24A5Q71RS6 500 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 SPRED2Q7Z698 418 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 MRPL10Q7Z7H8 261 aaKnown RBP6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 HERC6Q8IVU3 1022 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 THNSL1Q8IYQ7 743 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 SYCP3Q8IZU3 236 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 VWA5B2Q8N398 1253 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 SVOPQ8N4V2 548 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 SLC17A8Q8NDX2 589 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 TET1Q8NFU7 2136 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 HELQQ8TDG4 1101 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 TOP1MTQ969P6 601 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 CCDC47Q96A33 483 aaKnown RBP6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 HVCN1Q96D96 273 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 SAAL1Q96ER3 474 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 CCDC51Q96ER9 411 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 CCDC34Q96HJ3 373 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 FAM84AQ96KN4 292 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 CASD1Q96PB1 797 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 KCTD15Q96SI1 283 aaPredicted RBP6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 ARHGAP9Q9BRR9 750 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 TCHPQ9BT92 498 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 MSTO1Q9BUK6 570 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 TRAIPQ9BWF2 469 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 RC3H2Q9HBD1 1191 aaKnown RBP6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 AGPAT3Q9NRZ7 376 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 C1orf112Q9NSG2 853 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 RMND1Q9NWS8 449 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 MIOSQ9NXC5 875 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 SNTG2Q9NY99 539 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 KLK14Q9P0G3 267 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 KCNG1Q9UIX4 513 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 SLC4A7Q9Y6M7 1214 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 KAT6AQ92794 2004 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 LOXHD1Q8IVV2 1947 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 CEP290O15078 2479 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 UBE4BO95155 1302 aa6.24□□□□□ -1.41
HERPUD2-204ENST00000426180 LCHNA4D1U4 455 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 CLDN3O15551 220 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 EFCAB14O75071 495 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 ZNF623O75123 536 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 OFD1O75665 1012 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 STAG3L1P0CL83 205 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 CXCL8P10145 99 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 ITGA4P13612 1032 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 SCP2P22307 547 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 MATR3P43243 847 aaKnown RBP eCLIP6.23□□□□□ -1.414e-6■■■□□ 19.1
HERPUD2-204ENST00000426180 ACOT2P49753 483 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 CYP2J2P51589 502 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 STX17P56962 302 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 NLRP12P59046 1061 aa6.23□□□□□ -1.41
HERPUD2-204ENST00000426180 DHX9Q08211 1270 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms