RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 SFI1A8K8P3 1242 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 MAPTP10636 758 aaKnown RBP18.37■□□□□ 0.53
CCDC78-203ENST00000423653 HARSP12081 509 aaKnown RBP18.37■□□□□ 0.53
CCDC78-203ENST00000423653 FGFR3P22607 806 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 HOXA9P31269 272 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 LONP1P36776 959 aaKnown RBP18.37■□□□□ 0.53
CCDC78-203ENST00000423653 NUBP1P53384 320 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 VCPP55072 806 aaKnown RBP18.37■□□□□ 0.53
CCDC78-203ENST00000423653 XKR4Q5GH76 650 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 ZPBP2Q6X784 338 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 ANKS3Q6ZW76 656 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 BICD1Q96G01 975 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 KCNK12Q9HB15 430 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 GOLGA2P5Q9HBQ8 144 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.37■□□□□ 0.53
CCDC78-203ENST00000423653 CNTN3Q9P232 1028 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 EPS15L1Q9UBC2 864 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 DUSP12Q9UNI6 340 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.37■□□□□ 0.53
CCDC78-203ENST00000423653 TRIP11Q15643 1979 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 MYO10Q9HD67 2058 aa18.37■□□□□ 0.53
CCDC78-203ENST00000423653 ABLIM1O14639 778 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 XYLBO75191 536 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 C8AP07357 584 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 KCNE1P15382 129 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 AVPR2P30518 371 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 MATR3P43243 847 aaKnown RBP eCLIP18.36■□□□□ 0.53
CCDC78-203ENST00000423653 PPM1LQ5SGD2 360 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 ALKAL1Q6UXT8 129 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 WDFY4Q6ZS81 3184 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 GET4Q7L5D6 327 aaPredicted RBP18.36■□□□□ 0.53
CCDC78-203ENST00000423653 GPBP1Q86WP2 473 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 PRSS33Q8NF86 280 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 NXPE3Q969Y0 559 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 IRF2BPLQ9H1B7 796 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 SMOC2Q9H3U7 446 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 MTRRQ9UBK8 725 aa18.36■□□□□ 0.53
CCDC78-203ENST00000423653 PODXLO00592 558 aa18.35■□□□□ 0.53
CCDC78-203ENST00000423653 CLDN3O15551 220 aa18.35■□□□□ 0.53
CCDC78-203ENST00000423653 N4BP1O75113 896 aaKnown RBP18.35■□□□□ 0.53
CCDC78-203ENST00000423653 PDGFBP01127 241 aaPredicted RBP18.35■□□□□ 0.53
CCDC78-203ENST00000423653 RPL9P32969 192 aaKnown RBP18.35■□□□□ 0.53
CCDC78-203ENST00000423653 ABCD1P33897 745 aa18.35■□□□□ 0.53
CCDC78-203ENST00000423653 CUL4AQ13619 759 aa18.35■□□□□ 0.53
CCDC78-203ENST00000423653 RAB33AQ14088 237 aa18.35■□□□□ 0.53
CCDC78-203ENST00000423653 IER5LQ5T953 404 aa18.35■□□□□ 0.53
CCDC78-203ENST00000423653 RTL10Q7L3V2 364 aa18.35■□□□□ 0.53
CCDC78-203ENST00000423653 REEP2Q9BRK0 252 aa18.35■□□□□ 0.53
CCDC78-203ENST00000423653 FBXL21Q9UKT6 434 aa18.35■□□□□ 0.53
CCDC78-203ENST00000423653 BACE2Q9Y5Z0 518 aa18.35■□□□□ 0.53
CCDC78-203ENST00000423653 ZFP37Q9Y6Q3 630 aaPredicted RBP18.35■□□□□ 0.53
CCDC78-203ENST00000423653 PDCD11Q14690 1871 aaKnown RBP18.35■□□□□ 0.53
CCDC78-203ENST00000423653 K7ENM7 598 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 HNRNPDLO14979 420 aaKnown RBP18.34■□□□□ 0.53
CCDC78-203ENST00000423653 TBCAO75347 108 aaKnown RBP18.34■□□□□ 0.53
CCDC78-203ENST00000423653 FAM13AO94988 1023 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 KRT18P05783 430 aaKnown RBP18.34■□□□□ 0.53
CCDC78-203ENST00000423653 POU2F2P09086 479 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 TKTP29401 623 aaKnown RBP18.34■□□□□ 0.53
CCDC78-203ENST00000423653 OR1D2P34982 312 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 NCKAP1LP55160 1127 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 SOX4Q06945 474 aaPredicted RBP18.34■□□□□ 0.53
CCDC78-203ENST00000423653 MCL1Q07820 350 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 SF3A1Q15459 793 aaKnown RBP18.34■□□□□ 0.53
CCDC78-203ENST00000423653 KYAT1Q16773 422 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 C3orf58Q8NDZ4 430 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 SLC7A14Q8TBB6 771 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 KCNN1Q92952 543 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 MYADMQ96S97 322 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 PARVGQ9HBI0 331 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 NUB1Q9Y5A7 615 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 CDY1Q9Y6F8 540 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 PIEZO1Q92508 2521 aa18.34■□□□□ 0.53
CCDC78-203ENST00000423653 NPHP3-ACAD11A0A0J9YXS1 232 aa18.33■□□□□ 0.52
CCDC78-203ENST00000423653 SYN3O14994 580 aa18.33■□□□□ 0.52
CCDC78-203ENST00000423653 PLCG1P19174 1290 aa18.33■□□□□ 0.52
CCDC78-203ENST00000423653 FSHRP23945 695 aa18.33■□□□□ 0.52
CCDC78-203ENST00000423653 LIG4P49917 911 aa18.33■□□□□ 0.52
CCDC78-203ENST00000423653 MRE11P49959 708 aa18.33■□□□□ 0.52
CCDC78-203ENST00000423653 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
CCDC78-203ENST00000423653 UVSSAQ2YD98 709 aa18.33■□□□□ 0.52
CCDC78-203ENST00000423653 AXDND1Q5T1B0 1012 aaPredicted RBP18.33■□□□□ 0.52
CCDC78-203ENST00000423653 ASTLQ6HA08 431 aaPredicted RBP18.33■□□□□ 0.52
CCDC78-203ENST00000423653 HAUS6Q7Z4H7 955 aa18.33■□□□□ 0.52
CCDC78-203ENST00000423653 RAD54LQ92698 747 aa18.33■□□□□ 0.52
CCDC78-203ENST00000423653 ZBTB45Q96K62 511 aaPredicted RBP18.33■□□□□ 0.52
CCDC78-203ENST00000423653 ZMAT2Q96NC0 199 aaKnown RBP18.33■□□□□ 0.52
CCDC78-203ENST00000423653 PLEKHA5Q9HAU0 1116 aa18.33■□□□□ 0.52
CCDC78-203ENST00000423653 DOCK8Q8NF50 2099 aa18.33■□□□□ 0.52
CCDC78-203ENST00000423653 I3L4J1 428 aa18.32■□□□□ 0.52
CCDC78-203ENST00000423653 ADAM12O43184 909 aa18.32■□□□□ 0.52
CCDC78-203ENST00000423653 BRCC3P46736 316 aa18.32■□□□□ 0.52
CCDC78-203ENST00000423653 ZNF131P52739 623 aa18.32■□□□□ 0.52
CCDC78-203ENST00000423653 DHX8Q14562 1220 aaKnown RBP18.32■□□□□ 0.52
CCDC78-203ENST00000423653 KARSQ15046 597 aaKnown RBP18.32■□□□□ 0.52
CCDC78-203ENST00000423653 ARSHQ5FYA8 562 aa18.32■□□□□ 0.52
CCDC78-203ENST00000423653 ALYREFQ86V81 257 aaKnown RBP18.32■□□□□ 0.52
CCDC78-203ENST00000423653 MYCT1Q8N699 235 aa18.32■□□□□ 0.52
CCDC78-203ENST00000423653 LARP4BQ92615 738 aaKnown RBP18.32■□□□□ 0.52
CCDC78-203ENST00000423653 BLOC1S4Q9NUP1 217 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms