RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 SPATA1Q5VX52 437 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 KANK3Q6NY19 840 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 TMEM53Q6P2H8 277 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 MIGA2Q7L4E1 593 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 C14orf80Q86SX3 495 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 SMYD4Q8IYR2 804 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 PIGOQ8TEQ8 1089 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 UCMAQ8WVF2 138 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 IQCDQ96DY2 449 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ANKRD27Q96NW4 1050 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 INPP4AQ96PE3 977 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 NAP1L3Q99457 506 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 EIF2AQ9BY44 585 aaKnown RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 IFIH1Q9BYX4 1025 aaKnown RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 NDST4Q9H3R1 872 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 GPHNQ9NQX3 736 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ETNK2Q9NVF9 386 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 PCDHA4Q9UN74 947 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 TRIM33Q9UPN9 1127 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 TDRKHQ9Y2W6 561 aaKnown RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 SLC12A7Q9Y666 1083 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 EMSYQ7Z589 1322 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ZSCAN5CA6NGD5 496 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 FAM196BA6NMK8 535 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 KLRF2D3W0D1 207 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 FOXN1O15353 648 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 STAMBPO95630 424 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 FOSP01100 380 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 CCDC166P0CW27 439 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 CALB2P22676 271 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 METAP2P50579 478 aaKnown RBP eCLIP5.2□□□□□ -1.586e-7■□□□□ 11
ITGB1-205ENST00000423113 HAND2P61296 217 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 CRHR2Q13324 411 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 HSP90AA5PQ58FG0 334 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 FAM83BQ5T0W9 1011 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 RDM1Q8NG50 284 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 CXorf38Q8TB03 319 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 USP33Q8TEY7 942 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 TRIM47Q96LD4 638 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 MTMR9Q96QG7 549 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ALG1Q9BT22 464 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 STMN4Q9H169 189 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 PALMDQ9NP74 551 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ADAM22Q9P0K1 906 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 DKK3Q9UBP4 350 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 LRWD1Q9UFC0 647 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ZNF148Q9UQR1 794 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 LRCH1Q9Y2L9 728 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 KIAA1549LQ6ZVL6 1849 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 DENND4CQ5VZ89 1909 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 KLF18A0A0U1RQI7 1052 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ABLIM1O14639 778 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ACTN4O43707 911 aaKnown RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 LYPLA2O95372 231 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 CYBAP13498 195 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 STX2P32856 288 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 VHLP40337 213 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 PDE1BQ01064 536 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 SPP2Q13103 211 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 TBX2Q13207 712 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ZNF268Q14587 947 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 QRICH1Q2TAL8 776 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ZCWPW2Q504Y3 356 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 RFX8Q6ZV50 586 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 MCF2L2Q86YR7 1114 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 MMGT1Q8N4V1 131 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 GDAP1Q8TB36 358 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ETNPPLQ8TBG4 499 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 LENG1Q96BZ8 264 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 SH3GL1Q99961 368 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 OSBPL10Q9BXB5 764 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 AMNQ9BXJ7 453 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 OCEL1Q9H607 264 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 MLXIPQ9HAP2 919 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 RNPEPL1Q9HAU8 725 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 TMBIM4Q9HC24 238 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ZFYVE28Q9HCC9 887 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 PCDH18Q9HCL0 1135 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 INTS13Q9NVM9 706 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 EURLQ9NYK6 297 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 FBXL5Q9UKA1 691 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 ITGB1BP2Q9UKP3 347 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 USP15Q9Y4E8 981 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-205ENST00000423113 IVNS1ABPQ9Y6Y0 642 aa5.2□□□□□ -1.58
ITGB1-205ENST00000423113 TRIP12Q14669 1992 aaPredicted RBP5.19□□□□□ -1.58
ITGB1-205ENST00000423113 ANO9A1A5B4 782 aa5.19□□□□□ -1.58
ITGB1-205ENST00000423113 POTEFA5A3E0 1075 aa5.19□□□□□ -1.58
ITGB1-205ENST00000423113 LCA5LO95447 670 aa5.19□□□□□ -1.58
ITGB1-205ENST00000423113 MYCLP1P12525 358 aaPredicted RBP5.19□□□□□ -1.58
ITGB1-205ENST00000423113 COPB1P53618 953 aaKnown RBP5.19□□□□□ -1.58
ITGB1-205ENST00000423113 HMGCS2P54868 508 aa5.19□□□□□ -1.58
ITGB1-205ENST00000423113 ITGB3BPQ13352 177 aaPredicted RBP5.19□□□□□ -1.58
ITGB1-205ENST00000423113 MKRN4PQ13434 485 aaPredicted RBP5.19□□□□□ -1.58
ITGB1-205ENST00000423113 DENND2CQ68D51 928 aa5.19□□□□□ -1.58
ITGB1-205ENST00000423113 FAAH2Q6GMR7 532 aa5.19□□□□□ -1.58
ITGB1-205ENST00000423113 LRRC8BQ6P9F7 803 aa5.19□□□□□ -1.58
ITGB1-205ENST00000423113 FOXR2Q6PJQ5 311 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms