RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 ECT2Q9H8V3 914 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 FOXN3O00409 490 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 MEFVO15553 781 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 LPXNO60711 386 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 KRT38O76015 456 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 RAD23BP54727 409 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 NSUN2Q08J23 767 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 SPATA33Q96N06 139 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 POP1Q99575 1024 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 ZCWPW1Q9H0M4 648 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 THAP2Q9H0W7 228 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 SLITRK6Q9H5Y7 841 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 KIF9Q9HAQ2 790 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 RAB6BQ9NRW1 208 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 PLAGL2Q9UPG8 496 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 MYO3BQ8WXR4 1341 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 DUOXA2Q1HG44 320 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 LONP2Q86WA8 852 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 ZNF507Q8TCN5 953 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 SLC26A7Q8TE54 656 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 ZNF473Q8WTR7 871 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 HDAC7Q8WUI4 952 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 CCDC138Q96M89 665 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 TRIM56Q9BRZ2 755 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 NPHS2Q9NP85 383 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 OSGEPQ9NPF4 335 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 KLC4Q9NSK0 619 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 SPATS2LQ9NUQ6 558 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 HOXC10Q9NYD6 342 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 APOBEC2Q9Y235 224 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-208ENST00000422704 NEMP1O14524 444 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 APOEP02649 317 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 CIITAP33076 1130 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 GPC3P51654 580 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 KIF19Q2TAC6 998 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 FBXO33Q7Z6M2 555 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 KIRREL3Q8IZU9 778 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 KIF12Q96FN5 646 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 MCEEQ96PE7 176 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 Q9H521 79 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 FEM1BQ9UK73 627 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 NRAPQ86VF7 1730 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 SSU72P8A0A1W2PR75 194 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 NVLO15381 856 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 NR3C2P08235 984 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 STAT5BP51692 787 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 ALCAMQ13740 583 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 NTRK3Q16288 839 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 HEATR6Q6AI08 1181 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 ANGPTL8Q6UXH0 198 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 RGS9BPQ6ZS82 235 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 JAMLQ86YT9 394 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 EXOC8Q8IYI6 725 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 PARD3BQ8TEW8 1205 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 SDCCAG3Q96C92 435 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 PLA2G12BQ9BX93 195 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 STK33Q9BYT3 514 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 EPS15L1Q9UBC2 864 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 AGAP1Q9UPQ3 857 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 CHMP2BQ9UQN3 213 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 RFX7Q2KHR2 1363 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 HUS1O60921 280 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 LUC7L3O95232 432 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 GGPS1O95749 300 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 KRT10P13645 584 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 PDGFRAP16234 1089 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 CDR2Q01850 454 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 RSBN1LQ6PCB5 846 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 METTL23Q86XA0 190 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 TRIM42Q8IWZ5 723 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 RTKN2Q8IZC4 609 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 GPD1LQ8N335 351 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 CEP70Q8NHQ1 597 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 CCHCR1Q8TD31 782 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 MAP3K14Q99558 947 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 OSBPL1AQ9BXW6 950 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 TRABDQ9H4I3 376 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 ADA2Q9NZK5 511 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 SEL1LQ9UBV2 794 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 NAGPAQ9UK23 515 aa11.22□□□□□ -0.61
SEMA4D-208ENST00000422704 H3BQF6 201 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 SRGAP2BP0DMP2 458 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 XPAP23025 273 aaPredicted RBP11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 EIF3EP60228 445 aaKnown RBP11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 DNAJC3Q13217 504 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 HIF1AQ16665 826 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 KCNT1Q5JUK3 1230 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 SAMD7Q7Z3H4 446 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 RNF217Q8TC41 542 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 USP33Q8TEY7 942 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 FAM81BQ96LP2 452 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 JPH1Q9HDC5 661 aaPredicted RBP11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 EIF3HO15372 352 aaKnown RBP eCLIP11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 MED24O75448 989 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 OSBPP22059 807 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 PHEXP78562 749 aa11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 YWHAHQ04917 246 aaPredicted RBP11.21□□□□□ -0.61
SEMA4D-208ENST00000422704 ANO4Q32M45 955 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms