RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 UROC1Q96N76 676 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 CACNA1HO95180 2353 aa23.93■■□□□ 1.42
TRAF4-204ENST00000422344 CREMQ03060 361 aa23.93■■□□□ 1.42
TRAF4-204ENST00000422344 ITIH3Q06033 890 aa23.93■■□□□ 1.42
TRAF4-204ENST00000422344 MCL1Q07820 350 aa23.93■■□□□ 1.42
TRAF4-204ENST00000422344 ELAVL2Q12926 359 aaKnown RBP23.93■■□□□ 1.42
TRAF4-204ENST00000422344 PTPN21Q16825 1174 aa23.93■■□□□ 1.42
TRAF4-204ENST00000422344 ELMSAN1Q6PJG2 1045 aa23.93■■□□□ 1.42
TRAF4-204ENST00000422344 PDILTQ8N807 584 aa23.93■■□□□ 1.42
TRAF4-204ENST00000422344 RIN2Q8WYP3 895 aaPredicted RBP23.93■■□□□ 1.42
TRAF4-204ENST00000422344 DDX12PQ92771 950 aa23.93■■□□□ 1.42
TRAF4-204ENST00000422344 B3GALT6Q96L58 329 aa23.93■■□□□ 1.42
TRAF4-204ENST00000422344 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.93■■□□□ 1.42
TRAF4-204ENST00000422344 CHST7Q9NS84 486 aa23.93■■□□□ 1.42
TRAF4-204ENST00000422344 TEX28O15482 410 aa23.92■■□□□ 1.42
TRAF4-204ENST00000422344 NMT1P30419 496 aaKnown RBP23.92■■□□□ 1.42
TRAF4-204ENST00000422344 CLCN4P51793 760 aa23.92■■□□□ 1.42
TRAF4-204ENST00000422344 VCPP55072 806 aaKnown RBP23.92■■□□□ 1.42
TRAF4-204ENST00000422344 RARS2Q5T160 578 aaKnown RBP23.92■■□□□ 1.42
TRAF4-204ENST00000422344 FAM171A1Q5VUB5 890 aa23.92■■□□□ 1.42
TRAF4-204ENST00000422344 ATL3Q6DD88 541 aa23.92■■□□□ 1.42
TRAF4-204ENST00000422344 KCNG4Q8TDN1 519 aa23.92■■□□□ 1.42
TRAF4-204ENST00000422344 ADAM7Q9H2U9 754 aa23.92■■□□□ 1.42
TRAF4-204ENST00000422344 RXFP1Q9HBX9 757 aa23.92■■□□□ 1.42
TRAF4-204ENST00000422344 DPP7Q9UHL4 492 aa23.92■■□□□ 1.42
TRAF4-204ENST00000422344 MYMKA6NI61 221 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 CUTAO60888 179 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 B3GAT3O94766 335 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 GAP43P17677 238 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 KYAT1Q16773 422 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 SEZ6Q53EL9 994 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 XKR4Q5GH76 650 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 DCLRE1AQ6PJP8 1040 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 ALKAL1Q6UXT8 129 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 SFR1Q86XK3 245 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 CEP57Q86XR8 500 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 GPR65Q8IYL9 337 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 DDX27Q96GQ7 796 aaKnown RBP23.91■■□□□ 1.42
TRAF4-204ENST00000422344 RIPOR3Q96MK2 946 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 NECTIN4Q96NY8 510 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 TTPALQ9BTX7 342 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 SFXN1Q9H9B4 322 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 CNTN3Q9P232 1028 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 SEL1LQ9UBV2 794 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 CFAP45Q9UL16 551 aa23.91■■□□□ 1.42
TRAF4-204ENST00000422344 ZFHX2Q9C0A1 2572 aaPredicted RBP23.9■■□□□ 1.42
TRAF4-204ENST00000422344 GLUD1P00367 558 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 PIGRP01833 764 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 CLTAP09496 248 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 IDEP14735 1019 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 KCNE1P15382 129 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 CLCNKBP51801 687 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 GTF2BQ00403 316 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 PKP1Q13835 747 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 C12orf76Q8N812 135 aaPredicted RBP23.9■■□□□ 1.42
TRAF4-204ENST00000422344 MRPL44Q9H9J2 332 aaKnown RBP23.9■■□□□ 1.42
TRAF4-204ENST00000422344 GOLGA2P5Q9HBQ8 144 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 TSHZ2Q9NRE2 1034 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 CDH22Q9UJ99 828 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 MYO10Q9HD67 2058 aa23.9■■□□□ 1.42
TRAF4-204ENST00000422344 A0A087X0B3 334 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 TMEM189-UBE2V1I3L0A0 370 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 TRAPPC3O43617 180 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 AVPR2P30518 371 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 MTHFRP42898 656 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 ME1P48163 572 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 ZC2HC1CQ53FD0 456 aaPredicted RBP23.89■■□□□ 1.41
TRAF4-204ENST00000422344 PDXDC1Q6P996 788 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 MAP4K3Q8IVH8 894 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 FIZ1Q96SL8 496 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 MSTO1Q9BUK6 570 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 LRRC27Q9C0I9 530 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 ST6GALNAC4Q9H4F1 302 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 FAM86C1Q9NVL1 165 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 FNIP2Q9P278 1114 aa23.89■■□□□ 1.41
TRAF4-204ENST00000422344 CXCL8P10145 99 aa23.88■■□□□ 1.41
TRAF4-204ENST00000422344 PPP2R3AQ06190 1150 aa23.88■■□□□ 1.41
TRAF4-204ENST00000422344 UPP1Q16831 310 aa23.88■■□□□ 1.41
TRAF4-204ENST00000422344 RTP2Q5QGT7 225 aa23.88■■□□□ 1.41
TRAF4-204ENST00000422344 ATAT1Q5SQI0 421 aa23.88■■□□□ 1.41
TRAF4-204ENST00000422344 PRSS55Q6UWB4 352 aaPredicted RBP23.88■■□□□ 1.41
TRAF4-204ENST00000422344 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.88■■□□□ 1.41
TRAF4-204ENST00000422344 GLYCTKQ8IVS8 523 aa23.88■■□□□ 1.41
TRAF4-204ENST00000422344 HVCN1Q96D96 273 aa23.88■■□□□ 1.41
TRAF4-204ENST00000422344 ZMAT2Q96NC0 199 aaKnown RBP23.88■■□□□ 1.41
TRAF4-204ENST00000422344 PLEKHA5Q9HAU0 1116 aa23.88■■□□□ 1.41
TRAF4-204ENST00000422344 MAN1C1Q9NR34 630 aa23.88■■□□□ 1.41
TRAF4-204ENST00000422344 PODXLO00592 558 aa23.87■■□□□ 1.41
TRAF4-204ENST00000422344 OGTO15294 1046 aa23.87■■□□□ 1.41
TRAF4-204ENST00000422344 PDGFBP01127 241 aaPredicted RBP23.87■■□□□ 1.41
TRAF4-204ENST00000422344 SOX4Q06945 474 aaPredicted RBP23.87■■□□□ 1.41
TRAF4-204ENST00000422344 PSMD5Q16401 504 aa23.87■■□□□ 1.41
TRAF4-204ENST00000422344 SLC10A6Q3KNW5 377 aa23.87■■□□□ 1.41
TRAF4-204ENST00000422344 TMC5Q6UXY8 1006 aa23.87■■□□□ 1.41
TRAF4-204ENST00000422344 ZNF720Q7Z2F6 126 aa23.87■■□□□ 1.41
TRAF4-204ENST00000422344 PALB2Q86YC2 1186 aa23.87■■□□□ 1.41
TRAF4-204ENST00000422344 PIK3R5Q8WYR1 880 aa23.87■■□□□ 1.41
TRAF4-204ENST00000422344 DHX58Q96C10 678 aa23.87■■□□□ 1.41
TRAF4-204ENST00000422344 DNAJC19Q96DA6 116 aa23.87■■□□□ 1.41
TRAF4-204ENST00000422344 HAPLN2Q9GZV7 340 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms