RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 IKQ13123 557 aaPredicted RBP22.66■■□□□ 1.22
USP48-205ENST00000421625 SLC9A9Q8IVB4 645 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 FAM71AQ8IYT1 594 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 AGGF1Q8N302 714 aaeCLIP22.66■■□□□ 1.22
USP48-205ENST00000421625 PPM1KQ8N3J5 372 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 DCAF4Q8WV16 495 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 RPGRQ92834 1020 aaKnown RBP22.66■■□□□ 1.22
USP48-205ENST00000421625 SLC7A6OSQ96CW6 309 aaPredicted RBP22.66■■□□□ 1.22
USP48-205ENST00000421625 LRRC37BQ96QE4 947 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 EURLQ9NYK6 297 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 LY75O60449 1722 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 CBX6O95503 412 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 T-ENOLP0DO92 83 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 YARSP54577 528 aaKnown RBP22.65■■□□□ 1.22
USP48-205ENST00000421625 CETN1Q12798 172 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 NFIAQ12857 509 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 CYP4F22Q6NT55 531 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 ELMO3Q96BJ8 720 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 CBWD1Q9BRT8 395 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 TBC1D10AQ9BXI6 508 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 DCLK3Q9C098 648 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 STARD13Q9Y3M8 1113 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 A0A1W2PRG0 241 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 ASMTLO95671 621 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 PCK1P35558 622 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 MOGSQ13724 837 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 TEX9Q8N6V9 391 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 SUPT20HQ8NEM7 779 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 SLC5A5Q92911 643 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 GRID1Q9ULK0 1009 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 USH1CQ9Y6N9 552 aa22.65■■□□□ 1.22
USP48-205ENST00000421625 MAP3K13O43283 966 aa22.64■■□□□ 1.22
USP48-205ENST00000421625 SORBS3O60504 671 aa22.64■■□□□ 1.22
USP48-205ENST00000421625 SERPINB2P05120 415 aa22.64■■□□□ 1.22
USP48-205ENST00000421625 MYBL1P10243 752 aa22.64■■□□□ 1.22
USP48-205ENST00000421625 MAML1Q92585 1016 aa22.64■■□□□ 1.22
USP48-205ENST00000421625 ANKRD27Q96NW4 1050 aa22.64■■□□□ 1.22
USP48-205ENST00000421625 SMCHD1A6NHR9 2005 aa22.64■■□□□ 1.22
USP48-205ENST00000421625 C6orf229H3BNL8 230 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 K7ENM7 598 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 GAS8O95995 478 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 CALCAP01258 141 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 ADRA2BP18089 450 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 BIRC2Q13490 618 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 DAB2IPQ5VWQ8 1189 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 PHLDB2Q86SQ0 1253 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 DAW1Q8N136 415 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 ANKRD35Q8N283 1001 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 CERS5Q8N5B7 392 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 STRA6Q9BX79 667 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 HEMGNQ9BXL5 484 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 UVRAGQ9P2Y5 699 aa22.64■■□□□ 1.21
USP48-205ENST00000421625 SPDYE5A6NIY4 337 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 PSMD10O75832 226 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 HLA-DOAP06340 250 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 UBXN2AP68543 259 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 MAPK13O15264 365 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 ENTPD5O75356 428 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 ATP5HO75947 161 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 SH3GL3Q99963 347 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 TMEM117Q9H0C3 514 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 ANAPC7Q9UJX3 599 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 ACTL7BQ9Y614 415 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 ZNFX1Q9P2E3 1918 aaKnown RBP22.63■■□□□ 1.21
USP48-205ENST00000421625 GSTTP1A0A1W2PQM5 241 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 RIMBP2O15034 1052 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 ATP6V1C1P21283 382 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 STAT4Q14765 748 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 CDC42EP5Q6NZY7 148 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 SIAH1Q8IUQ4 282 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 PLVAPQ9BX97 442 aa22.63■■□□□ 1.21
USP48-205ENST00000421625 CYP11B1P15538 503 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 PTDSS1P48651 473 aaKnown RBP22.62■■□□□ 1.21
USP48-205ENST00000421625 CAV1Q03135 178 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 GRIPAP1Q4V328 841 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 SYDE1Q6ZW31 735 aaPredicted RBP22.62■■□□□ 1.21
USP48-205ENST00000421625 ASAP3Q8TDY4 903 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 INPP5DQ92835 1189 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 CYP3A4P08684 503 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 GCAP28676 217 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 MXI1P50539 228 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 IZUMO3Q5VZ72 239 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 GRK7Q8WTQ7 553 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 SEMA4DQ92854 862 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 CCDC77Q9BR77 488 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 DENND2DQ9H6A0 471 aaPredicted RBP22.62■■□□□ 1.21
USP48-205ENST00000421625 ADAMTSL1Q8N6G6 1762 aa22.62■■□□□ 1.21
USP48-205ENST00000421625 MAGEB2O15479 319 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 POTEJP0CG39 1038 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 MAPK4P31152 587 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 TRABD2AQ86V40 505 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 ATL2Q8NHH9 583 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 DENND1AQ8TEH3 1009 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 MKL1Q969V6 931 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 VTI1AQ96AJ9 217 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 NEU2Q9Y3R4 380 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 PRELPP51888 382 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 ENDOVQ8N8Q3 282 aaKnown RBP22.61■■□□□ 1.21
USP48-205ENST00000421625 NACC1Q96RE7 527 aa22.61■■□□□ 1.21
USP48-205ENST00000421625 SYT15Q9BQS2 421 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms