RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 PADI3Q9ULW8 664 aa14.9□□□□□ -0.02
CHMP5-202ENST00000419016 ZC3H11AO75152 810 aaKnown RBP eCLIP14.89□□□□□ -0.037e-12■■■■□ 26.2
CHMP5-202ENST00000419016 HLA-DRAP01903 254 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 GJA8P48165 433 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 DSC3Q14574 896 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 HGSNATQ68CP4 663 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 TRAPPC11Q7Z392 1133 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 ANKRD33Q7Z3H0 272 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 ARHGEF19Q8IW93 802 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 CXorf38Q8TB03 319 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 HELQQ8TDG4 1101 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 CCDC94Q9BW85 323 aaPredicted RBP14.89□□□□□ -0.03
CHMP5-202ENST00000419016 TRAIPQ9BWF2 469 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 MTMR12Q9C0I1 747 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 NXF3Q9H4D5 531 aaKnown RBP14.89□□□□□ -0.03
CHMP5-202ENST00000419016 SNTG2Q9NY99 539 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 DNAJC12Q9UKB3 198 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 HES2Q9Y543 173 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 TFRCP02786 760 aaKnown RBP14.89□□□□□ -0.03
CHMP5-202ENST00000419016 NFICP08651 508 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 GHRP10912 638 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 CD52P31358 61 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 XKR4Q5GH76 650 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 C1orf53Q5VUE5 145 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 CYP26C1Q6V0L0 522 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 RAD9BQ6WBX8 426 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 IRF2BP2Q7Z5L9 587 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 CD302Q8IX05 232 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 SMG8Q8ND04 991 aaKnown RBP14.89□□□□□ -0.03
CHMP5-202ENST00000419016 CAGE1Q8TC20 777 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 FAM212AQ96EL1 285 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 CXCL16Q9H2A7 254 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 KCND1Q9NSA2 647 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 C2CD2Q9Y426 696 aa14.89□□□□□ -0.03
CHMP5-202ENST00000419016 SOWAHDA6NJG2 315 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 NRDCO43847 1150 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 CST3P01034 146 aaPredicted RBP14.88□□□□□ -0.03
CHMP5-202ENST00000419016 NFX1Q12986 1120 aaKnown RBP14.88□□□□□ -0.03
CHMP5-202ENST00000419016 MTF1Q14872 753 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 ZBTB6Q15916 424 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 TSR1Q2NL82 804 aaKnown RBP14.88□□□□□ -0.03
CHMP5-202ENST00000419016 JADE1Q6IE81 842 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 SLC39A5Q6ZMH5 540 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 NT5DC4Q86YG4 428 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 SNX27Q96L92 541 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 KREMEN1Q96MU8 473 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 ARHGAP20Q9P2F6 1191 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 IPPQ9Y573 584 aa14.88□□□□□ -0.03
CHMP5-202ENST00000419016 F8VZ95 297 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 RECQL4O94761 1208 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 TFAMQ00059 246 aaKnown RBP14.87□□□□□ -0.03
CHMP5-202ENST00000419016 BIRC3Q13489 604 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 NCOA4Q13772 614 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 DRAP1Q14919 205 aaPredicted RBP14.87□□□□□ -0.03
CHMP5-202ENST00000419016 SFMBT2Q5VUG0 894 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 ANKLE1Q8NAG6 615 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 TATDN2Q93075 761 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 PI4K2AQ9BTU6 479 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 TRIM6Q9C030 488 aaPredicted RBP14.87□□□□□ -0.03
CHMP5-202ENST00000419016 UBE2TQ9NPD8 197 aaPredicted RBP14.87□□□□□ -0.03
CHMP5-202ENST00000419016 ZNHIT6Q9NWK9 470 aaKnown RBP14.87□□□□□ -0.03
CHMP5-202ENST00000419016 CNTN3Q9P232 1028 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 SIX4Q9UIU6 781 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 DERAQ9Y315 318 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 MGEA5O60502 916 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 ASS1P00966 412 aaKnown RBP14.87□□□□□ -0.03
CHMP5-202ENST00000419016 GCNT1Q02742 428 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 PAK2Q13177 524 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 GPNMBQ14956 572 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 TWF2Q6IBS0 349 aaKnown RBP14.87□□□□□ -0.03
CHMP5-202ENST00000419016 C1orf127Q8N9H9 656 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 KAT5Q92993 513 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 ZMAT2Q96NC0 199 aaKnown RBP14.87□□□□□ -0.03
CHMP5-202ENST00000419016 TOX2Q96NM4 488 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 NT5C1BQ96P26 610 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 SPAG5Q96R06 1193 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 XYLT2Q9H1B5 865 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 APOBEC3GQ9HC16 384 aaKnown RBP14.87□□□□□ -0.03
CHMP5-202ENST00000419016 PCDHB2Q9Y5E7 798 aa14.87□□□□□ -0.03
CHMP5-202ENST00000419016 TULP1O00294 542 aaPredicted RBP14.86□□□□□ -0.03
CHMP5-202ENST00000419016 PITPNM1O00562 1244 aa14.86□□□□□ -0.03
CHMP5-202ENST00000419016 ZNF623O75123 536 aa14.86□□□□□ -0.03
CHMP5-202ENST00000419016 SELPP16109 830 aa14.86□□□□□ -0.03
CHMP5-202ENST00000419016 PRKCIP41743 596 aa14.86□□□□□ -0.03
CHMP5-202ENST00000419016 PIK3CAP42336 1068 aa14.86□□□□□ -0.03
CHMP5-202ENST00000419016 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
CHMP5-202ENST00000419016 RAPGEF1Q13905 1077 aa14.86□□□□□ -0.03
CHMP5-202ENST00000419016 TMEM132DQ14C87 1099 aa14.86□□□□□ -0.03
CHMP5-202ENST00000419016 ASTE1Q2TB18 679 aaPredicted RBP14.86□□□□□ -0.03
CHMP5-202ENST00000419016 MRPL10Q7Z7H8 261 aaKnown RBP14.86□□□□□ -0.03
CHMP5-202ENST00000419016 C17orf53Q8N3J3 647 aaPredicted RBP14.86□□□□□ -0.03
CHMP5-202ENST00000419016 DIS3LQ8TF46 1054 aaKnown RBP14.86□□□□□ -0.03
CHMP5-202ENST00000419016 ELMO3Q96BJ8 720 aa14.86□□□□□ -0.03
CHMP5-202ENST00000419016 ANKRD36BP1Q96IX9 119 aa14.86□□□□□ -0.03
CHMP5-202ENST00000419016 FAM105AQ9NUU6 356 aa14.86□□□□□ -0.03
CHMP5-202ENST00000419016 FOXN3O00409 490 aaPredicted RBP14.85□□□□□ -0.03
CHMP5-202ENST00000419016 ZNF500O60304 480 aaPredicted RBP14.85□□□□□ -0.03
CHMP5-202ENST00000419016 TNNC2P02585 160 aa14.85□□□□□ -0.03
CHMP5-202ENST00000419016 SERPING1P05155 500 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms