RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 HNRNPDLO14979 420 aaKnown RBP22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 URODP06132 367 aa22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 CXCL8P10145 99 aa22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 HOXB8P17481 243 aaPredicted RBP22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 GAP43P17677 238 aa22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 LIG4P49917 911 aa22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 YARSP54577 528 aaKnown RBP22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 TRIM9Q9C026 710 aa22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 CPSF3Q9UKF6 684 aaKnown RBP22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 CFAP45Q9UL16 551 aa22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 SF3B1O75533 1304 aaKnown RBP eCLIP22.52■■□□□ 1.2
PKNOX1-202ENST00000418336 LOC730098B7Z3J9 87 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 TADA2AO75478 443 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 CLTAP09496 248 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 MYBP10242 640 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 EHHADHQ08426 723 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 BMS1Q14692 1282 aaKnown RBP22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 ENOX2Q16206 610 aaKnown RBP22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 USP41Q3LFD5 358 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 LILRA6Q6PI73 481 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 DCLRE1AQ6PJP8 1040 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 C12orf76Q8N812 135 aaPredicted RBP22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 GLIS3Q8NEA6 775 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 LNX1Q8TBB1 728 aaPredicted RBP22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 LEO1Q8WVC0 666 aaPredicted RBP22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 DHX58Q96C10 678 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 HVCN1Q96D96 273 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 UROC1Q96N76 676 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 APOL5Q9BWW9 433 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 EMILIN2Q9BXX0 1053 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 ADAM7Q9H2U9 754 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 CUEDC2Q9H467 287 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 FNIP2Q9P278 1114 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 FAM50BQ9Y247 325 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 DENND4AQ7Z401 1863 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 TCHHQ07283 1943 aa22.51■■□□□ 1.19
PKNOX1-202ENST00000418336 OGTO15294 1046 aa22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 FGFR3P22607 806 aa22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 ABCD1P33897 745 aa22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 CA8P35219 290 aa22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 CBX2Q14781 532 aaPredicted RBP22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 L1TD1Q5T7N2 865 aaKnown RBP22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 CRELD2Q6UXH1 353 aaPredicted RBP22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 PIK3R5Q8WYR1 880 aa22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 BICD1Q96G01 975 aa22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 FBXL18Q96ME1 805 aa22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 CLSTN3Q9BQT9 956 aa22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 PLEKHA5Q9HAU0 1116 aa22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 TBC1D7Q9P0N9 293 aa22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 TUBGCP4Q9UGJ1 667 aa22.5■■□□□ 1.19
PKNOX1-202ENST00000418336 C2orf16Q68DN1 1984 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 C1RP00736 705 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 SRGAP2BP0DMP2 458 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 RPL17P18621 184 aaKnown RBP22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 HOXD13P35453 343 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 ME1P48163 572 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 PRSS55Q6UWB4 352 aaPredicted RBP22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 PPFIBP1Q86W92 1011 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 RIN2Q8WYP3 895 aaPredicted RBP22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 HPS3Q969F9 1004 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 C7orf25Q9BPX7 421 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 TTPALQ9BTX7 342 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 MRPL44Q9H9J2 332 aaKnown RBP22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 PANK4Q9NVE7 773 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 DZANK1Q9NVP4 752 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 HPSEQ9Y251 543 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 SSX2IPQ9Y2D8 614 aa22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 MTCL1Q9Y4B5 1905 aaKnown RBP22.49■■□□□ 1.19
PKNOX1-202ENST00000418336 LACTBL1A8MY62 500 aa22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 PODXLO00592 558 aa22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 POLR2DO15514 142 aaKnown RBP22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 ADAM12O43184 909 aa22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 B3GAT3O94766 335 aa22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 KLRC2P26717 231 aa22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 BRCC3P46736 316 aa22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 FAM171A1Q5VUB5 890 aa22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 RSPO2Q6UXX9 243 aaPredicted RBP22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 IQUBQ8NA54 791 aa22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 ZSWIM2Q8NEG5 633 aa22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 PHF7Q9BWX1 381 aaPredicted RBP22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 EPHX3Q9H6B9 360 aa22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 SLC38A7Q9NVC3 462 aa22.48■■□□□ 1.19
PKNOX1-202ENST00000418336 FAM237AA0A1B0GTK4 181 aa22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 PI4K2BG5E9Z4 385 aa22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 ACTN4O43707 911 aaKnown RBP22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 WEE2P0C1S8 567 aa22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 CASP1P29466 404 aa22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 LRPAP1P30533 357 aa22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 ITIH3Q06033 890 aa22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 SPAG1Q07617 926 aa22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 TPRNQ4KMQ1 711 aa22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 HERC4Q5GLZ8 1057 aaPredicted RBP22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 EPM2AIP1Q7L775 607 aaPredicted RBP22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 DDX27Q96GQ7 796 aaKnown RBP22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 POMKQ9H5K3 350 aa22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.47■■□□□ 1.19
PKNOX1-202ENST00000418336 TRIOO75962 3097 aa22.46■■□□□ 1.19
PKNOX1-202ENST00000418336 I3L4J1 428 aa22.46■■□□□ 1.19
PKNOX1-202ENST00000418336 TGM5O43548 720 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms