RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 RIN2Q8WYP3 895 aaPredicted RBP12.04□□□□□ -0.48
TM9SF4-203ENST00000417389 C18orf25Q96B23 403 aaPredicted RBP12.04□□□□□ -0.48
TM9SF4-203ENST00000417389 PAGE5Q96GU1 130 aa12.04□□□□□ -0.48
TM9SF4-203ENST00000417389 PPP1R10Q96QC0 940 aaKnown RBP12.04□□□□□ -0.48
TM9SF4-203ENST00000417389 HERC2P3Q9BVR0 1158 aa12.04□□□□□ -0.48
TM9SF4-203ENST00000417389 VN1R3Q9BXE9 311 aa12.04□□□□□ -0.48
TM9SF4-203ENST00000417389 GPR62Q9BZJ7 368 aa12.04□□□□□ -0.48
TM9SF4-203ENST00000417389 HAPLN2Q9GZV7 340 aa12.04□□□□□ -0.48
TM9SF4-203ENST00000417389 CNTN3Q9P232 1028 aa12.04□□□□□ -0.48
TM9SF4-203ENST00000417389 CD207Q9UJ71 328 aa12.04□□□□□ -0.48
TM9SF4-203ENST00000417389 UNC80Q8N2C7 3258 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 BRWD1Q9NSI6 2320 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 A0A0B4J269 797 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 A0A1W2PQ27 194 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 A0A1W2PQ64 194 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 A0A1W2PQD8 194 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 FRMD3A2A2Y4 597 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 LACTBL1A8MY62 500 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 PODXLO00592 558 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 XPOTO43592 962 aaKnown RBP12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 TRAPPC3O43617 180 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 CLASP2O75122 1294 aaKnown RBP12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 TBX10O75333 385 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 ELAVL2Q12926 359 aaKnown RBP12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 ENOX2Q16206 610 aaKnown RBP12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 PUS10Q3MIT2 529 aaKnown RBP12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 ARMCX5Q6P1M9 558 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 SLC39A4Q6P5W5 647 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 DCLRE1AQ6PJP8 1040 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 PPFIBP1Q86W92 1011 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 NELFCDQ8IXH7 590 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 CASP10Q92851 521 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 SAAL1Q96ER3 474 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 DDX27Q96GQ7 796 aaKnown RBP12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 ZMAT2Q96NC0 199 aaKnown RBP12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 UHRF1Q96T88 793 aaPredicted RBP12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 FGFBP2Q9BYJ0 223 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 PCIF1Q9H4Z3 704 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 PLEKHA5Q9HAU0 1116 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 SLC39A2Q9NP94 309 aa12.03□□□□□ -0.48
TM9SF4-203ENST00000417389 PVALEFA0A1B0GWK0 134 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 GOLGA8IPA6NC78 632 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 GOLGA8JA6NMD2 632 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 I3L4J1 428 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 PPP1R37O75864 691 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 ADH1AP07327 375 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 CNPP09543 421 aaKnown RBP12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 KCNE1P15382 129 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 LTBRP36941 435 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 SOX4Q06945 474 aaPredicted RBP12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 NAB2Q15742 525 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 CTC1Q2NKJ3 1217 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 ELMSAN1Q6PJG2 1045 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 ALKAL1Q6UXT8 129 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 GLIS3Q8NEA6 775 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 BEST2Q8NFU1 509 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 KCNN1Q92952 543 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 IPO9Q96P70 1041 aaKnown RBP12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 KLHL5Q96PQ7 755 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 TTPALQ9BTX7 342 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 GOLPH3LQ9H4A5 285 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 TUBGCP4Q9UGJ1 667 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 UBQLN1Q9UMX0 589 aaKnown RBP12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 HCFC2Q9Y5Z7 792 aa12.02□□□□□ -0.49
TM9SF4-203ENST00000417389 TTC26A0AVF1 554 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 EIF3DO15371 548 aaKnown RBP eCLIP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 ZNF202O95125 648 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 GLP2RO95838 553 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 LDHAP00338 332 aaKnown RBP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 BMP1P13497 986 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 IL9P15248 144 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 EPCAMP16422 314 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 RPL17P18621 184 aaKnown RBP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 SSTR3P32745 418 aaPredicted RBP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 RPL9P32969 192 aaKnown RBP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 MCM4P33991 863 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 BRCC3P46736 316 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 DSG1Q02413 1049 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 CREMQ03060 361 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 SMAD4Q13485 552 aaKnown RBP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 TMEM132DQ14C87 1099 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 UPP1Q16831 310 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 XKR4Q5GH76 650 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 JADE1Q6IE81 842 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 CES5AQ6NT32 575 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 ANKRD54Q6NXT1 300 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 PRSS55Q6UWB4 352 aaPredicted RBP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 KRBA2Q6ZNG9 492 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 HS2ST1Q7LGA3 356 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 PALB2Q86YC2 1186 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 CD302Q8IX05 232 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 VN1R2Q8NFZ6 395 aa12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 NECAB3Q96P71 396 aaPredicted RBP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 COL25A1Q9BXS0 654 aaPredicted RBP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.01□□□□□ -0.49
TM9SF4-203ENST00000417389 CHMP5Q9NZZ3 219 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms