RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 EPS15L1Q9UBC2 864 aa27.74■■■□□ 2.03
VEGFA-208ENST00000417285 FBXW11Q9UKB1 542 aa27.74■■■□□ 2.03
VEGFA-208ENST00000417285 SCP2P22307 547 aa27.73■■■□□ 2.03
VEGFA-208ENST00000417285 VCPP55072 806 aaKnown RBP27.73■■■□□ 2.03
VEGFA-208ENST00000417285 RAD51AP2Q09MP3 1159 aa27.73■■■□□ 2.03
VEGFA-208ENST00000417285 RAB33AQ14088 237 aa27.73■■■□□ 2.03
VEGFA-208ENST00000417285 UVSSAQ2YD98 709 aa27.73■■■□□ 2.03
VEGFA-208ENST00000417285 ZPBP2Q6X784 338 aa27.73■■■□□ 2.03
VEGFA-208ENST00000417285 ALYREFQ86V81 257 aaKnown RBP27.73■■■□□ 2.03
VEGFA-208ENST00000417285 CEP120Q8N960 986 aa27.73■■■□□ 2.03
VEGFA-208ENST00000417285 PRSS33Q8NF86 280 aa27.73■■■□□ 2.03
VEGFA-208ENST00000417285 N4BP1O75113 896 aaKnown RBP27.72■■■□□ 2.03
VEGFA-208ENST00000417285 PDGFBP01127 241 aaPredicted RBP27.72■■■□□ 2.03
VEGFA-208ENST00000417285 MAPTP10636 758 aaKnown RBP27.72■■■□□ 2.03
VEGFA-208ENST00000417285 RPL9P32969 192 aaKnown RBP27.72■■■□□ 2.03
VEGFA-208ENST00000417285 SMOC2Q9H3U7 446 aa27.72■■■□□ 2.03
VEGFA-208ENST00000417285 BACE2Q9Y5Z0 518 aa27.72■■■□□ 2.03
VEGFA-208ENST00000417285 ZFP37Q9Y6Q3 630 aaPredicted RBP27.72■■■□□ 2.03
VEGFA-208ENST00000417285 CACNA1HO95180 2353 aa27.72■■■□□ 2.03
VEGFA-208ENST00000417285 ABLIM1O14639 778 aa27.71■■■□□ 2.03
VEGFA-208ENST00000417285 HOXA9P31269 272 aa27.71■■■□□ 2.03
VEGFA-208ENST00000417285 LONP1P36776 959 aaKnown RBP27.71■■■□□ 2.03
VEGFA-208ENST00000417285 CD300LGQ6UXG3 332 aa27.71■■■□□ 2.03
VEGFA-208ENST00000417285 ANKS3Q6ZW76 656 aa27.71■■■□□ 2.03
VEGFA-208ENST00000417285 SNX27Q96L92 541 aa27.71■■■□□ 2.03
VEGFA-208ENST00000417285 MFSD1Q9H3U5 465 aa27.71■■■□□ 2.03
VEGFA-208ENST00000417285 MTRRQ9UBK8 725 aa27.71■■■□□ 2.03
VEGFA-208ENST00000417285 ODF2LQ9ULJ1 636 aa27.71■■■□□ 2.03
VEGFA-208ENST00000417285 DUSP12Q9UNI6 340 aa27.71■■■□□ 2.03
VEGFA-208ENST00000417285 CLDN3O15551 220 aa27.7■■■□□ 2.02
VEGFA-208ENST00000417285 OR1D2P34982 312 aa27.7■■■□□ 2.02
VEGFA-208ENST00000417285 CLCN5P51795 746 aa27.7■■■□□ 2.02
VEGFA-208ENST00000417285 SF3A1Q15459 793 aaKnown RBP27.7■■■□□ 2.02
VEGFA-208ENST00000417285 ARSHQ5FYA8 562 aa27.7■■■□□ 2.02
VEGFA-208ENST00000417285 PPM1LQ5SGD2 360 aa27.7■■■□□ 2.02
VEGFA-208ENST00000417285 KCNN1Q92952 543 aa27.7■■■□□ 2.02
VEGFA-208ENST00000417285 MYADMQ96S97 322 aa27.7■■■□□ 2.02
VEGFA-208ENST00000417285 CNTN3Q9P232 1028 aa27.7■■■□□ 2.02
VEGFA-208ENST00000417285 XYLBO75191 536 aa27.69■■■□□ 2.02
VEGFA-208ENST00000417285 LAMP2P13473 410 aa27.69■■■□□ 2.02
VEGFA-208ENST00000417285 MRE11P49959 708 aa27.69■■■□□ 2.02
VEGFA-208ENST00000417285 NOLC1Q14978 699 aaKnown RBP eCLIP27.69■■■□□ 2.02
VEGFA-208ENST00000417285 ASTLQ6HA08 431 aaPredicted RBP27.69■■■□□ 2.02
VEGFA-208ENST00000417285 INTS4Q96HW7 963 aaKnown RBP27.69■■■□□ 2.02
VEGFA-208ENST00000417285 ZBTB45Q96K62 511 aaPredicted RBP27.69■■■□□ 2.02
VEGFA-208ENST00000417285 ZMAT2Q96NC0 199 aaKnown RBP27.69■■■□□ 2.02
VEGFA-208ENST00000417285 GOLGA2P5Q9HBQ8 144 aa27.69■■■□□ 2.02
VEGFA-208ENST00000417285 PODXLO00592 558 aa27.68■■■□□ 2.02
VEGFA-208ENST00000417285 ADAM12O43184 909 aa27.68■■■□□ 2.02
VEGFA-208ENST00000417285 C8AP07357 584 aa27.68■■■□□ 2.02
VEGFA-208ENST00000417285 POU2F2P09086 479 aa27.68■■■□□ 2.02
VEGFA-208ENST00000417285 SOX4Q06945 474 aaPredicted RBP27.68■■■□□ 2.02
VEGFA-208ENST00000417285 MCL1Q07820 350 aa27.68■■■□□ 2.02
VEGFA-208ENST00000417285 TCF15Q12870 199 aa27.68■■■□□ 2.02
VEGFA-208ENST00000417285 AXDND1Q5T1B0 1012 aaPredicted RBP27.68■■■□□ 2.02
VEGFA-208ENST00000417285 PLEKHA5Q9HAU0 1116 aa27.68■■■□□ 2.02
VEGFA-208ENST00000417285 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.68■■■□□ 2.02
VEGFA-208ENST00000417285 PLXNA3P51805 1871 aa27.68■■■□□ 2.02
VEGFA-208ENST00000417285 DENND4AQ7Z401 1863 aa27.68■■■□□ 2.02
VEGFA-208ENST00000417285 MTCL1Q9Y4B5 1905 aaKnown RBP27.67■■■□□ 2.02
VEGFA-208ENST00000417285 FSHRP23945 695 aa27.67■■■□□ 2.02
VEGFA-208ENST00000417285 IGFBP6P24592 240 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-208ENST00000417285 TKTP29401 623 aaKnown RBP27.67■■■□□ 2.02
VEGFA-208ENST00000417285 NCKAP1LP55160 1127 aa27.67■■■□□ 2.02
VEGFA-208ENST00000417285 KYAT1Q16773 422 aa27.67■■■□□ 2.02
VEGFA-208ENST00000417285 HAUS6Q7Z4H7 955 aa27.67■■■□□ 2.02
VEGFA-208ENST00000417285 SLC44A3Q8N4M1 653 aa27.67■■■□□ 2.02
VEGFA-208ENST00000417285 C3orf58Q8NDZ4 430 aa27.67■■■□□ 2.02
VEGFA-208ENST00000417285 RASSF8Q8NHQ8 419 aa27.67■■■□□ 2.02
VEGFA-208ENST00000417285 ANKFY1Q9P2R3 1169 aa27.67■■■□□ 2.02
VEGFA-208ENST00000417285 WNT16Q9UBV4 365 aa27.67■■■□□ 2.02
VEGFA-208ENST00000417285 FBXL21Q9UKT6 434 aa27.67■■■□□ 2.02
VEGFA-208ENST00000417285 CDY1Q9Y6F8 540 aa27.67■■■□□ 2.02
VEGFA-208ENST00000417285 NPHP3-ACAD11A0A0J9YXS1 232 aa27.66■■■□□ 2.02
VEGFA-208ENST00000417285 SYN3O14994 580 aa27.66■■■□□ 2.02
VEGFA-208ENST00000417285 CLTAP09496 248 aa27.66■■■□□ 2.02
VEGFA-208ENST00000417285 HARSP12081 509 aaKnown RBP27.66■■■□□ 2.02
VEGFA-208ENST00000417285 SYT1P21579 422 aa27.66■■■□□ 2.02
VEGFA-208ENST00000417285 ABCD1P33897 745 aa27.66■■■□□ 2.02
VEGFA-208ENST00000417285 SLC10A6Q3KNW5 377 aa27.66■■■□□ 2.02
VEGFA-208ENST00000417285 GRASPQ7Z6J2 395 aaPredicted RBP27.66■■■□□ 2.02
VEGFA-208ENST00000417285 GPBP1Q86WP2 473 aa27.66■■■□□ 2.02
VEGFA-208ENST00000417285 NUB1Q9Y5A7 615 aa27.66■■■□□ 2.02
VEGFA-208ENST00000417285 C2orf16Q68DN1 1984 aa27.66■■■□□ 2.02
VEGFA-208ENST00000417285 K7ELQ4 463 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-208ENST00000417285 GALR2O43603 387 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-208ENST00000417285 MATR3P43243 847 aaKnown RBP eCLIP27.65■■■□□ 2.02
VEGFA-208ENST00000417285 BRCC3P46736 316 aa27.65■■■□□ 2.02
VEGFA-208ENST00000417285 GET4Q7L5D6 327 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-208ENST00000417285 MYCT1Q8N699 235 aa27.65■■■□□ 2.02
VEGFA-208ENST00000417285 ZNF461Q8TAF7 563 aa27.65■■■□□ 2.02
VEGFA-208ENST00000417285 SLC7A14Q8TBB6 771 aa27.65■■■□□ 2.02
VEGFA-208ENST00000417285 BICD1Q96G01 975 aa27.65■■■□□ 2.02
VEGFA-208ENST00000417285 REEP2Q9BRK0 252 aa27.65■■■□□ 2.02
VEGFA-208ENST00000417285 ANHXE9PGG2 379 aa27.64■■■□□ 2.02
VEGFA-208ENST00000417285 H7C4K7 107 aa27.64■■■□□ 2.02
VEGFA-208ENST00000417285 I3L4J1 428 aa27.64■■■□□ 2.02
VEGFA-208ENST00000417285 ZNF131P52739 623 aa27.64■■■□□ 2.02
VEGFA-208ENST00000417285 GRIN1Q05586 938 aa27.64■■■□□ 2.02
VEGFA-208ENST00000417285 SLC8B1Q6J4K2 584 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms