RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PDAP1Q13442 181 aaKnown RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 GPD1LQ8N335 351 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 USP38Q8NB14 1042 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 RUBCNLQ9H714 662 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 CAND2O75155 1236 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 GRAP2O75791 330 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 SMNDC1O75940 238 aaKnown RBP eCLIP12.68□□□□□ -0.382e-7■■■□□ 15.4
UBR4-205ENST00000417040 KRT75O95678 551 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 AKR1B1P15121 316 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 COMTP21964 271 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 JAK3P52333 1124 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 ZC2HC1CQ53FD0 456 aaPredicted RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 MXD3Q9BW11 206 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 CAAP1Q9H8G2 361 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 EML4Q9HC35 981 aaKnown RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 TBC1D23Q9NUY8 699 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 CHCHD3Q9NX63 227 aaKnown RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 RBAKQ9NYW8 714 aaPredicted RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 USP6P35125 1406 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 WDR47O94967 919 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 NQO1P15559 274 aaKnown RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 PSMC5P62195 406 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 CC2D2BQ6DHV5 1058 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 FOXR1Q6PIV2 292 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 DNAAF5Q86Y56 855 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 CDKL3Q8IVW4 592 aaPredicted RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 SMAD5Q99717 465 aaKnown RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 MAD2L2Q9UI95 211 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 DISP1Q96F81 1524 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 KIF1BO60333 1816 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 KRT8P05787 483 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 MAGEA4P43358 317 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 CATSPER4Q7RTX7 472 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 MTBPQ96DY7 904 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 NSL1Q96IY1 281 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 ZFATQ9P243 1243 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 APOA1P02647 267 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 UCHL3P15374 230 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 CDC25CP30307 473 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 NLRP11P59045 1033 aaKnown RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 ZNF200P98182 395 aaPredicted RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 DSG1Q02413 1049 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 NAB2Q15742 525 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 CATSPER1Q8NEC5 780 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 DTNBP1Q96EV8 351 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 VPS50Q96JG6 964 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 AP5M1Q9H0R1 490 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 ISCUQ9H1K1 167 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 ALDH8A1Q9H2A2 487 aaPredicted RBP12.68□□□□□ -0.38
UBR4-205ENST00000417040 RAB6BQ9NRW1 208 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 TMEM2Q9UHN6 1383 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 MYO3BQ8WXR4 1341 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 CDHR2Q9BYE9 1310 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 MYMKA6NI61 221 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 KLRC1P26715 233 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 NFX1Q12986 1120 aaKnown RBP12.67□□□□□ -0.38
UBR4-205ENST00000417040 TMCO5AQ8N6Q1 288 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 PHF20Q9BVI0 1012 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 TRIM9Q9C026 710 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 TASP1Q9H6P5 420 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 CPSF1Q10570 1443 aaKnown RBP12.67□□□□□ -0.38
UBR4-205ENST00000417040 ADGRA2Q96PE1 1338 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 WEE2P0C1S8 567 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 INPP5AQ14642 412 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 DNAL1Q4LDG9 190 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 GJC2Q5T442 439 aaPredicted RBP12.67□□□□□ -0.38
UBR4-205ENST00000417040 CCDC81Q6ZN84 652 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 AFG1LQ8WV93 481 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 NMD3Q96D46 503 aaKnown RBP12.67□□□□□ -0.38
UBR4-205ENST00000417040 C18orf8Q96DM3 657 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 DHX36Q9H2U1 1008 aaKnown RBP12.67□□□□□ -0.38
UBR4-205ENST00000417040 RNPEPQ9H4A4 650 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 ZNF302Q9NR11 478 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 APEX2Q9UBZ4 518 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 ZC3H7BQ9UGR2 993 aaKnown RBP12.67□□□□□ -0.38
UBR4-205ENST00000417040 SMG5Q9UPR3 1016 aaKnown RBP12.67□□□□□ -0.38
UBR4-205ENST00000417040 CPDO75976 1380 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 PRR36Q9H6K5 1346 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 CTDNEP1O95476 244 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 ITIH2P19823 946 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 VHLP40337 213 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 FOXO4P98177 505 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 MAPK6Q16659 721 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 CCDC33Q8N5R6 958 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 CALR3Q96L12 384 aaKnown RBP12.67□□□□□ -0.38
UBR4-205ENST00000417040 ASPSCR1Q9BZE9 553 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 NEUROG2Q9H2A3 272 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 SEL1LQ9UBV2 794 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 LAMC1P11047 1609 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 CDK12Q9NYV4 1490 aaPredicted RBP12.67□□□□□ -0.38
UBR4-205ENST00000417040 RFX1P22670 979 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 ACOT2P49753 483 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 SULT1E1P49888 294 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 KCNB1Q14721 858 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 KIZQ2M2Z5 673 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 QRICH1Q2TAL8 776 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 FUT11Q495W5 492 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 REEP2Q9BRK0 252 aa12.67□□□□□ -0.38
UBR4-205ENST00000417040 MRPL1Q9BYD6 325 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms