RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SUSD2Q9UGT4 822 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 LIMCH1Q9UPQ0 1083 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 UBIAD1Q9Y5Z9 338 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 TRIOBPQ9H2D6 2365 aa5.52□□□□□ -1.53
VPS41-205ENST00000414632 ELP1O95163 1332 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 STK36Q9NRP7 1315 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 SZT2Q5T011 3432 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 MYH15Q9Y2K3 1946 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 CCDC163A0A0D9SF12 145 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 MEGF11A6BM72 1044 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 DLL1O00548 723 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 EDIL3O43854 480 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 CLEC3AO75596 197 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 STAM2O75886 525 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 CABYRO75952 493 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 TDP2O95551 362 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 FOSP01100 380 aaPredicted RBP5.51□□□□□ -1.53
VPS41-205ENST00000414632 LGALS2P05162 132 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 EPHX1P07099 455 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 NAT2P11245 290 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 MYCLP1P12525 358 aaPredicted RBP5.51□□□□□ -1.53
VPS41-205ENST00000414632 KCNA2P16389 499 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 MARK3P27448 753 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 GNA11P29992 359 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 ICAM3P32942 547 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 CYP2C18P33260 490 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 TCF7P36402 384 aaPredicted RBP5.51□□□□□ -1.53
VPS41-205ENST00000414632 ZNF143P52747 638 aaPredicted RBP5.51□□□□□ -1.53
VPS41-205ENST00000414632 EPHB4P54760 987 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 CCL23P55773 120 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 ZNF200P98182 395 aaPredicted RBP5.51□□□□□ -1.53
VPS41-205ENST00000414632 ITGB3BPQ13352 177 aaPredicted RBP5.51□□□□□ -1.53
VPS41-205ENST00000414632 SLBPQ14493 270 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS41-205ENST00000414632 NEDD9Q14511 834 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 RABEP1Q15276 862 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 NPY5RQ15761 445 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 INF2Q27J81 1249 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 KIAA0753Q2KHM9 967 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 CEP55Q53EZ4 464 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 EARS2Q5JPH6 523 aaKnown RBP5.51□□□□□ -1.53
VPS41-205ENST00000414632 FAM209AQ5JX71 171 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 TDRD10Q5VZ19 366 aaKnown RBP5.51□□□□□ -1.53
VPS41-205ENST00000414632 XRRA1Q6P2D8 792 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 KCNV1Q6PIU1 500 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 ANKRD33Q7Z3H0 272 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 PPFIBP1Q86W92 1011 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 PLA2G4DQ86XP0 818 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 PPTC7Q8NI37 304 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 BAHD1Q8TBE0 780 aaPredicted RBP5.51□□□□□ -1.53
VPS41-205ENST00000414632 BICD2Q8TD16 824 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 TBCKQ8TEA7 893 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 NINJ1Q92982 152 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 MFSD3Q96ES6 412 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 TBC1D32Q96NH3 1257 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 GPR20Q99678 358 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 CDC6Q99741 560 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 GDF15Q99988 308 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 LBHD1Q9BQE6 289 aaPredicted RBP5.51□□□□□ -1.53
VPS41-205ENST00000414632 ATXN3LQ9H3M9 355 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 AGO4Q9HCK5 861 aaKnown RBP5.51□□□□□ -1.53
VPS41-205ENST00000414632 JADE2Q9NQC1 790 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 SH3GLB2Q9NR46 395 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 ARHGEF4Q9NR80 690 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 KCNH7Q9NS40 1196 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 HDAC6Q9UBN7 1215 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 TBX21Q9UL17 535 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 TET1Q8NFU7 2136 aa5.51□□□□□ -1.53
VPS41-205ENST00000414632 MROH7Q68CQ1 1323 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 IGLV3-22A0A075B6J6 115 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 CCDC194A0A1B0GVG4 234 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 GSTTP1A0A1W2PQM5 241 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 C9IYK1 514 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 MEIS1O00470 390 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 KIAA0355O15063 1070 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 CHMP2AO43633 222 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 KPNA6O60684 536 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 WISP1O95388 367 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 F2P00734 622 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 CST3P01034 146 aaPredicted RBP5.5□□□□□ -1.53
VPS41-205ENST00000414632 CD4P01730 458 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 TGFB3P10600 412 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 DRD2P14416 443 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 KRT2P35908 639 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 HSP90AA2PQ14568 343 aaPredicted RBP5.5□□□□□ -1.53
VPS41-205ENST00000414632 PTGISQ16647 500 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 LETM2Q2VYF4 491 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 PLEKHG6Q3KR16 790 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 TM4SF20Q53R12 229 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 PRR16Q569H4 304 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 C9orf50Q5SZB4 431 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 AXDND1Q5T1B0 1012 aaPredicted RBP5.5□□□□□ -1.53
VPS41-205ENST00000414632 YOD1Q5VVQ6 348 aaPredicted RBP5.5□□□□□ -1.53
VPS41-205ENST00000414632 KRT40Q6A162 431 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 HEATR6Q6AI08 1181 aaKnown RBP5.5□□□□□ -1.53
VPS41-205ENST00000414632 METTL7BQ6UX53 244 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 PIK3AP1Q6ZUJ8 805 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 DYMQ7RTS9 669 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 TRMT1LQ7Z2T5 733 aaKnown RBP5.5□□□□□ -1.53
VPS41-205ENST00000414632 UBE3DQ7Z6J8 389 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 C7orf31Q8N865 590 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms