RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 PTPN21Q16825 1174 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 BBS9Q3SYG4 887 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 MMEL1Q495T6 779 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 ARHGAP29Q52LW3 1261 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 CEP55Q53EZ4 464 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 KCNT1Q5JUK3 1230 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 CCDC183Q5T5S1 534 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 CDKAL1Q5VV42 579 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 RNF219Q5W0B1 726 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 CCDC149Q6ZUS6 474 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 BNIPLQ7Z465 357 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF804AQ7Z570 1209 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 CCDC83Q8IWF9 413 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 MRPL41Q8IXM3 137 aaKnown RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 MFSD4AQ8N468 514 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 SMYD1Q8NB12 490 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 CTCFLQ8NI51 663 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 SLC30A5Q8TAD4 765 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 ABHD4Q8TB40 342 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 NOC3LQ8WTT2 800 aaKnown RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 PPP1R13LQ8WUF5 828 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 TRIM63Q969Q1 353 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 SPATA17Q96L03 361 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 RHOVQ96L33 236 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 Q96M66 194 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 NOC4LQ9BVI4 516 aaKnown RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 TTLL2Q9BWV7 592 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 TSGA10Q9BZW7 698 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 B3GNT4Q9C0J1 378 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 PUS7LQ9H0K6 701 aaKnown RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 GBP3Q9H0R5 595 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 MYLK2Q9H1R3 596 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 EHD1Q9H4M9 534 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 C8orf33Q9H7E9 229 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 ACAD9Q9H845 621 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 CARS2Q9HA77 564 aaKnown RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 XAB2Q9HCS7 855 aaKnown RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 MCM9Q9NXL9 1143 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 DACT1Q9NYF0 836 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 FNIP2Q9P278 1114 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 EIF2B4Q9UI10 523 aaKnown RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 TEKT2Q9UIF3 430 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 CROTQ9UKG9 612 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 EDARQ9UNE0 448 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 CHTOPQ9Y3Y2 248 aaKnown RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 PCDHB12Q9Y5F1 795 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 ZFP37Q9Y6Q3 630 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 TNKSO95271 1327 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 MAP3K19Q56UN5 1328 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 FRMPD2Q68DX3 1309 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 MROH5Q6ZUA9 1318 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 A0A0B4J269 797 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 F5H0A9 414 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 GOLGA6L19H0YKK7 550 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 YKT6O15498 198 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 GPR39O43194 453 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 DNAJA2O60884 412 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 CILPO75339 1184 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 OFD1O75665 1012 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 TRIM16O95361 564 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 APOA4P06727 396 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 VIMP08670 466 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 CELA3BP08861 270 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 C6orf222P0C671 652 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 DLATP10515 647 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 PCNAP12004 261 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ALAS1P13196 640 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 TMEM11P17152 192 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ARF4P18085 180 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ATP5JP18859 108 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 SFPQP23246 707 aaKnown RBP eCLIP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ATP5F1P24539 256 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 MCM4P33991 863 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 MTIF2P46199 727 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 NPTX2P47972 431 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ALDH3A2P51648 485 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 TKTL1P51854 596 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 BLVRAP53004 296 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ARFIP1P53367 373 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ARPC4P59998 168 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 CAP1Q01518 475 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 RPL6Q02878 288 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ACY1Q03154 408 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 TNK2Q07912 1038 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 KLHL30Q0D2K2 578 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 PABPC4Q13310 644 aaKnown RBP eCLIP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ADAM15Q13444 863 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 SMAD4Q13485 552 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 LAMB3Q13751 1172 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 COL9A2Q14055 689 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 TRIM71Q2Q1W2 868 aaKnown RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 MTERF2Q49AM1 385 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ODF2Q5BJF6 829 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF362Q5T0B9 420 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-203ENST00000414174 SFRP5Q5T4F7 317 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 AADACL4Q5VUY2 407 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 FAM205BPQ63HN1 556 aa3.95□□□□□ -1.78
SF3B1-203ENST00000414174 INTS3Q68E01 1043 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 898.6 ms