RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ARRDC4Q8NCT1 418 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 DRC3Q9H069 523 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 ORC6Q9Y5N6 252 aa18.26■□□□□ 0.51
PHRF1-202ENST00000413872 COPS2P61201 443 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 TMPRSS15P98073 1019 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 ARHGAP23Q9P227 1491 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 GPR182O15218 404 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 PMS2P54278 862 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 SH3BGRP55822 239 aaPredicted RBP18.25■□□□□ 0.51
PHRF1-202ENST00000413872 IFT88Q13099 833 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 NFRKBQ6P4R8 1299 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 ATL2Q8NHH9 583 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 UNC45AQ9H3U1 944 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 TMEM247A6NEH6 219 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 HOXA2O43364 376 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 CTDNEP1O95476 244 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 TAF6P49848 677 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 NLRP11P59045 1033 aaKnown RBP18.25■□□□□ 0.51
PHRF1-202ENST00000413872 FKBP1CQ5VVH2 108 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 DNERQ8NFT8 737 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 MIPOL1Q8TD10 442 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 PPME1Q9Y570 386 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 A0A1W2PQJ5 194 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 GNGT2O14610 69 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 TTC19Q6DKK2 380 aaPredicted RBP18.25■□□□□ 0.51
PHRF1-202ENST00000413872 TRIM55Q9BYV6 548 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 ZNF212Q9UDV6 495 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 TTC7AQ9ULT0 858 aaPredicted RBP18.25■□□□□ 0.51
PHRF1-202ENST00000413872 TBX20Q9UMR3 447 aa18.25■□□□□ 0.51
PHRF1-202ENST00000413872 TMCC1O94876 653 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 HOXC6P09630 235 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 ST8SIA6P61647 398 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 SKIV2LQ15477 1246 aaKnown RBP18.24■□□□□ 0.51
PHRF1-202ENST00000413872 RNPC3Q96LT9 517 aaKnown RBP18.24■□□□□ 0.51
PHRF1-202ENST00000413872 FGD4Q96M96 766 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 KIAA1683Q9H0B3 1180 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 TAF1DQ9H5J8 278 aaPredicted RBP18.24■□□□□ 0.51
PHRF1-202ENST00000413872 SLC13A4Q9UKG4 626 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 ZC3H4Q9UPT8 1303 aaKnown RBP18.24■□□□□ 0.51
PHRF1-202ENST00000413872 PRRG1O14668 218 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 MAPK13O15264 365 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 SRGAP2O75044 1071 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 SUPT20HL2P0C7V6 817 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 VCAM1P19320 739 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 NPEPPSP55786 919 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 EIF3EP60228 445 aaKnown RBP18.24■□□□□ 0.51
PHRF1-202ENST00000413872 EFHC1Q5JVL4 640 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 GBP7Q8N8V2 638 aaPredicted RBP18.24■□□□□ 0.51
PHRF1-202ENST00000413872 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.24■□□□□ 0.513e-9■■■■■ 80.2
PHRF1-202ENST00000413872 EXT2Q93063 718 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 NAMPTP43490 491 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 ARHGAP18Q8N392 663 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 GIPC2Q8TF65 315 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 DDX47Q9H0S4 455 aaKnown RBP18.24■□□□□ 0.51
PHRF1-202ENST00000413872 PCDHB7Q9Y5E2 793 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 TMEM62Q0P6H9 643 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 ZC2HC1CQ53FD0 456 aaPredicted RBP18.24■□□□□ 0.51
PHRF1-202ENST00000413872 PCNX4Q63HM2 1172 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 TXNRD3Q86VQ6 643 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 ULK4Q96C45 1275 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 KLHL29Q96CT2 875 aa18.24■□□□□ 0.51
PHRF1-202ENST00000413872 TARS2Q9BW92 718 aaKnown RBP18.24■□□□□ 0.51
PHRF1-202ENST00000413872 CYP2C8P10632 490 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 HOXA10P31260 410 aaPredicted RBP18.23■□□□□ 0.51
PHRF1-202ENST00000413872 FSCBQ5H9T9 825 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 PDCD7Q8N8D1 485 aaKnown RBP18.23■□□□□ 0.51
PHRF1-202ENST00000413872 DPF2Q92785 391 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 ALKBH8Q96BT7 664 aaKnown RBP18.23■□□□□ 0.51
PHRF1-202ENST00000413872 COLEC11Q9BWP8 271 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 VPS11Q9H270 941 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 SCAF8Q9UPN6 1271 aaKnown RBP18.23■□□□□ 0.51
PHRF1-202ENST00000413872 PPLO60437 1756 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 DCTN3O75935 186 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 NCF2P19878 526 aaPredicted RBP18.23■□□□□ 0.51
PHRF1-202ENST00000413872 KRT17Q04695 432 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 PPM1NQ8N819 430 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 KRT35Q92764 455 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 TTC17Q96AE7 1141 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 WDR91A4D1P6 747 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 OGTO15294 1046 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 PDIA2Q13087 525 aaKnown RBP18.23■□□□□ 0.51
PHRF1-202ENST00000413872 P3H1Q32P28 736 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 IZUMO3Q5VZ72 239 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 OR6P1Q8NGX9 317 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 SYN2Q92777 582 aaPredicted RBP18.23■□□□□ 0.51
PHRF1-202ENST00000413872 PPWD1Q96BP3 646 aaKnown RBP18.23■□□□□ 0.51
PHRF1-202ENST00000413872 RMDN1Q96DB5 314 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 ZNF512Q96ME7 567 aaPredicted RBP18.23■□□□□ 0.51
PHRF1-202ENST00000413872 ABCF3Q9NUQ8 709 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 DFFAO00273 331 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 CCDC144BQ3MJ40 725 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 GPC2Q8N158 579 aa18.23■□□□□ 0.51
PHRF1-202ENST00000413872 TACO1Q9BSH4 297 aaKnown RBP18.23■□□□□ 0.51
PHRF1-202ENST00000413872 MANSC4A6NHS7 340 aaPredicted RBP18.22■□□□□ 0.51
PHRF1-202ENST00000413872 C3orf70A6NLC5 250 aaPredicted RBP18.22■□□□□ 0.51
PHRF1-202ENST00000413872 DCDC2CA8MYV0 355 aa18.22■□□□□ 0.51
PHRF1-202ENST00000413872 NPTXRO95502 500 aa18.22■□□□□ 0.51
PHRF1-202ENST00000413872 IFNA8P32881 189 aa18.22■□□□□ 0.51
PHRF1-202ENST00000413872 OAZ1P54368 228 aa18.22■□□□□ 0.51
PHRF1-202ENST00000413872 GALCP54803 685 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms