RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 IDEP14735 1019 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 STAT6P42226 847 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 NASPP49321 788 aaPredicted RBP11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 ZNF131P52739 623 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 MCL1Q07820 350 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 NOLC1Q14978 699 aaKnown RBP eCLIP11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 UPP1Q16831 310 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 ZBTB41Q5SVQ8 909 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 CD300LGQ6UXG3 332 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 ZPBP2Q6X784 338 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 CCDC73Q6ZRK6 1079 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 SFR1Q86XK3 245 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 C3orf58Q8NDZ4 430 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 LNX1Q8TBB1 728 aaPredicted RBP11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 RIPOR3Q96MK2 946 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 CLSTN3Q9BQT9 956 aa11.12□□□□□ -0.63
NCKIPSD-202ENST00000413374 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 LACTBL1A8MY62 500 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 C2CD4DB7Z1M9 353 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 PODXLO00592 558 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 HNRNPDLO14979 420 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 BRD1O95696 1058 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 F13A1P00488 732 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 CLTAP09496 248 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 TKTP29401 623 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 MTHFRP42898 656 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 PSMD5Q16401 504 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 XKR4Q5GH76 650 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 HERC4Q5GLZ8 1057 aaPredicted RBP11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 SLC39A4Q6P5W5 647 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 GPR149Q86SP6 731 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 CHAMP1Q96JM3 812 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 FIZ1Q96SL8 496 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 MSTO1Q9BUK6 570 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 SFXN1Q9H9B4 322 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 MRPL44Q9H9J2 332 aaKnown RBP11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 CNTN3Q9P232 1028 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 STK17AQ9UEE5 414 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 TUBGCP4Q9UGJ1 667 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 LIMD1Q9UGP4 676 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 ZMYM2Q9UBW7 1377 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 TTC28Q96AY4 2481 aa11.11□□□□□ -0.63
NCKIPSD-202ENST00000413374 BRWD1Q9NSI6 2320 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 GPR37L1O60883 481 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 KCNE1P15382 129 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 OR1D2P34982 312 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 ACOT2P49753 483 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 GUCY2FP51841 1108 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 ARPP19P56211 112 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 GTF2BQ00403 316 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 KCNA1Q09470 495 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 LILRA6Q6PI73 481 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 SHC4Q6S5L8 630 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 RSPO2Q6UXX9 243 aaPredicted RBP11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 ZNF720Q7Z2F6 126 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 KREMEN2Q8NCW0 462 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 ST13P5Q8NFI4 369 aaPredicted RBP11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 PIK3R5Q8WYR1 880 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 DHX58Q96C10 678 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 DNAJC19Q96DA6 116 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 DDX27Q96GQ7 796 aaKnown RBP11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 UROC1Q96N76 676 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 NECTIN4Q96NY8 510 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 RPF1Q9H9Y2 349 aaKnown RBP11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 PIDD1Q9HB75 910 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 SLC38A7Q9NVC3 462 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 PANK4Q9NVE7 773 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 FNIP2Q9P278 1114 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 NR2E1Q9Y466 385 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 NUB1Q9Y5A7 615 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 CUL9Q8IWT3 2517 aa11.1□□□□□ -0.63
NCKIPSD-202ENST00000413374 OGTO15294 1046 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 TRAPPC3O43617 180 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 CUTAO60888 179 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 PPP6R2O75170 966 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 GCNT3O95395 438 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 PIGRP01833 764 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 ASGR2P07307 311 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 FGFR3P22607 806 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 DNM1Q05193 864 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 ELAVL2Q12926 359 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 ENOX2Q16206 610 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 ADALQ6DHV7 355 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 MAP4K3Q8IVH8 894 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 NOC3LQ8WTT2 800 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 SMG7Q92540 1137 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 EDAQ92838 391 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 HPS3Q969F9 1004 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 FGFBP2Q9BYJ0 223 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 SMOC2Q9H3U7 446 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 DPP7Q9UHL4 492 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 PCDHA7Q9UN72 937 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 POLIQ9UNA4 740 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 TIMM13Q9Y5L4 95 aaPredicted RBP11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 CDY1Q9Y6F8 540 aa11.09□□□□□ -0.63
NCKIPSD-202ENST00000413374 A0A0B4J269 797 aa11.08□□□□□ -0.64
NCKIPSD-202ENST00000413374 TTC26A0AVF1 554 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms