RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 TCF15Q12870 199 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 UPP1Q16831 310 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 PPM1LQ5SGD2 360 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 RASSF8Q8NHQ8 419 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 CALML4Q96GE6 196 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 AK8Q96MA6 479 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 SLC38A7Q9NVC3 462 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 KCND2Q9NZV8 630 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 KCNG1Q9UIX4 513 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 FBXL21Q9UKT6 434 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 DUSP12Q9UNI6 340 aa24.44■■□□□ 1.5
MSH6-202ENST00000411819 NPHP3-ACAD11A0A0J9YXS1 232 aa24.43■■□□□ 1.5
MSH6-202ENST00000411819 I3L4J1 428 aa24.43■■□□□ 1.5
MSH6-202ENST00000411819 ADAM12O43184 909 aa24.43■■□□□ 1.5
MSH6-202ENST00000411819 FGFR3P22607 806 aa24.43■■□□□ 1.5
MSH6-202ENST00000411819 TKTP29401 623 aaKnown RBP24.43■■□□□ 1.5
MSH6-202ENST00000411819 OR1D2P34982 312 aa24.43■■□□□ 1.5
MSH6-202ENST00000411819 MATR3P43243 847 aaKnown RBP eCLIP24.43■■□□□ 1.5
MSH6-202ENST00000411819 BRCC3P46736 316 aa24.43■■□□□ 1.5
MSH6-202ENST00000411819 NOLC1Q14978 699 aaKnown RBP eCLIP24.43■■□□□ 1.5
MSH6-202ENST00000411819 C3orf58Q8NDZ4 430 aa24.43■■□□□ 1.5
MSH6-202ENST00000411819 TMEM161BQ8NDZ6 487 aa24.43■■□□□ 1.5
MSH6-202ENST00000411819 RSAD2Q8WXG1 361 aa24.43■■□□□ 1.5
MSH6-202ENST00000411819 ZBTB45Q96K62 511 aaPredicted RBP24.43■■□□□ 1.5
MSH6-202ENST00000411819 NTPCRQ9BSD7 190 aaKnown RBP24.43■■□□□ 1.5
MSH6-202ENST00000411819 MTRRQ9UBK8 725 aa24.43■■□□□ 1.5
MSH6-202ENST00000411819 POLIQ9UNA4 740 aa24.43■■□□□ 1.5
MSH6-202ENST00000411819 PDCD11Q14690 1871 aaKnown RBP24.43■■□□□ 1.5
MSH6-202ENST00000411819 VPS37CA5D8V6 355 aaPredicted RBP24.42■■□□□ 1.5
MSH6-202ENST00000411819 PODXLO00592 558 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 ABLIM1O14639 778 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 PAPLNO95428 1278 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 BMP15O95972 392 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 UBA7P41226 1012 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 DHX8Q14562 1220 aaKnown RBP24.42■■□□□ 1.5
MSH6-202ENST00000411819 XKR4Q5GH76 650 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 ALKAL1Q6UXT8 129 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 BRAPQ7Z569 592 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 FLCNQ8NFG4 579 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 SLC7A14Q8TBB6 771 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 BICD1Q96G01 975 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 DDX27Q96GQ7 796 aaKnown RBP24.42■■□□□ 1.5
MSH6-202ENST00000411819 ZMAT2Q96NC0 199 aaKnown RBP24.42■■□□□ 1.5
MSH6-202ENST00000411819 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.42■■□□□ 1.53e-14■■■□□ 16.2
MSH6-202ENST00000411819 LARSQ9P2J5 1176 aaKnown RBP24.42■■□□□ 1.5
MSH6-202ENST00000411819 EPS15L1Q9UBC2 864 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 CDY1Q9Y6F8 540 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 DOCK6Q96HP0 2047 aa24.42■■□□□ 1.5
MSH6-202ENST00000411819 CCL16O15467 120 aa24.41■■□□□ 1.5
MSH6-202ENST00000411819 NARSO43776 548 aaKnown RBP24.41■■□□□ 1.5
MSH6-202ENST00000411819 TOM1L1O75674 476 aa24.41■■□□□ 1.5
MSH6-202ENST00000411819 HNRNPA1P09651 372 aaKnown RBP eCLIP24.41■■□□□ 1.5
MSH6-202ENST00000411819 MAPTP10636 758 aaKnown RBP24.41■■□□□ 1.5
MSH6-202ENST00000411819 SEZ6Q53EL9 994 aa24.41■■□□□ 1.5
MSH6-202ENST00000411819 ANKS3Q6ZW76 656 aa24.41■■□□□ 1.5
MSH6-202ENST00000411819 GRASPQ7Z6J2 395 aaPredicted RBP24.41■■□□□ 1.5
MSH6-202ENST00000411819 GPBP1Q86WP2 473 aa24.41■■□□□ 1.5
MSH6-202ENST00000411819 TMEM105Q8N8V8 129 aa24.41■■□□□ 1.5
MSH6-202ENST00000411819 PHOX2BQ99453 314 aa24.41■■□□□ 1.5
MSH6-202ENST00000411819 CNTN3Q9P232 1028 aa24.41■■□□□ 1.5
MSH6-202ENST00000411819 FSHRP23945 695 aa24.4■■□□□ 1.5
MSH6-202ENST00000411819 RAB33AQ14088 237 aa24.4■■□□□ 1.5
MSH6-202ENST00000411819 ASTLQ6HA08 431 aaPredicted RBP24.4■■□□□ 1.5
MSH6-202ENST00000411819 CD300LGQ6UXG3 332 aa24.4■■□□□ 1.5
MSH6-202ENST00000411819 REEP2Q9BRK0 252 aa24.4■■□□□ 1.5
MSH6-202ENST00000411819 FAM86C1Q9NVL1 165 aa24.4■■□□□ 1.5
MSH6-202ENST00000411819 ODF2LQ9ULJ1 636 aa24.4■■□□□ 1.5
MSH6-202ENST00000411819 NUB1Q9Y5A7 615 aa24.4■■□□□ 1.5
MSH6-202ENST00000411819 H0YCG3 227 aa24.39■■□□□ 1.49
MSH6-202ENST00000411819 CLDN3O15551 220 aa24.39■■□□□ 1.49
MSH6-202ENST00000411819 SLC26A4O43511 780 aa24.39■■□□□ 1.49
MSH6-202ENST00000411819 XYLBO75191 536 aa24.39■■□□□ 1.49
MSH6-202ENST00000411819 KRT18P05783 430 aaKnown RBP24.39■■□□□ 1.49
MSH6-202ENST00000411819 CFHP08603 1231 aa24.39■■□□□ 1.49
MSH6-202ENST00000411819 KCNE1P15382 129 aa24.39■■□□□ 1.49
MSH6-202ENST00000411819 NCKAP1LP55160 1127 aa24.39■■□□□ 1.49
MSH6-202ENST00000411819 NTHL1P78549 312 aa24.39■■□□□ 1.49
MSH6-202ENST00000411819 SF3A1Q15459 793 aaKnown RBP24.39■■□□□ 1.49
MSH6-202ENST00000411819 ARSHQ5FYA8 562 aa24.39■■□□□ 1.49
MSH6-202ENST00000411819 AXDND1Q5T1B0 1012 aaPredicted RBP24.39■■□□□ 1.49
MSH6-202ENST00000411819 ZPBP2Q6X784 338 aa24.39■■□□□ 1.49
MSH6-202ENST00000411819 SIX5Q8N196 739 aa24.39■■□□□ 1.49
MSH6-202ENST00000411819 C18orf25Q96B23 403 aaPredicted RBP24.39■■□□□ 1.49
MSH6-202ENST00000411819 K7ENM7 598 aa24.38■■□□□ 1.49
MSH6-202ENST00000411819 FAM13AO94988 1023 aa24.38■■□□□ 1.49
MSH6-202ENST00000411819 LAMP2P13473 410 aa24.38■■□□□ 1.49
MSH6-202ENST00000411819 PLCG1P19174 1290 aa24.38■■□□□ 1.49
MSH6-202ENST00000411819 HOXA9P31269 272 aa24.38■■□□□ 1.49
MSH6-202ENST00000411819 LONP1P36776 959 aaKnown RBP24.38■■□□□ 1.49
MSH6-202ENST00000411819 GRIN1Q05586 938 aa24.38■■□□□ 1.49
MSH6-202ENST00000411819 KARSQ15046 597 aaKnown RBP24.38■■□□□ 1.49
MSH6-202ENST00000411819 RSPO2Q6UXX9 243 aaPredicted RBP24.38■■□□□ 1.49
MSH6-202ENST00000411819 HAUS6Q7Z4H7 955 aa24.38■■□□□ 1.49
MSH6-202ENST00000411819 ST13P5Q8NFI4 369 aaPredicted RBP24.38■■□□□ 1.49
MSH6-202ENST00000411819 BACE2Q9Y5Z0 518 aa24.38■■□□□ 1.49
MSH6-202ENST00000411819 MEFVO15553 781 aaPredicted RBP24.37■■□□□ 1.49
MSH6-202ENST00000411819 GALR2O43603 387 aaPredicted RBP24.37■■□□□ 1.49
MSH6-202ENST00000411819 CXCL8P10145 99 aa24.37■■□□□ 1.49
MSH6-202ENST00000411819 LIG4P49917 911 aa24.37■■□□□ 1.49
MSH6-202ENST00000411819 NUBP1P53384 320 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms