RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 PRG3Q9Y2Y8 225 aaPredicted RBP7.17□□□□□ -1.26
LINC00396-201ENST00000411690 A0A0D9SFI3 127 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 SPDYE3A6NKU9 549 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 DDX39AO00148 427 aaKnown RBP7.16□□□□□ -1.26
LINC00396-201ENST00000411690 CCL16O15467 120 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 ZNF623O75123 536 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 XYLBO75191 536 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 RPP40O75818 363 aaKnown RBP7.16□□□□□ -1.26
LINC00396-201ENST00000411690 CCDC192P0DO97 292 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 ATP4AP20648 1035 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 COL8A1P27658 744 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 KIF5BP33176 963 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 OR1G1P47890 313 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 RAB27AP51159 221 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 GPC3P51654 580 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 GRM4Q14833 912 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 TUSC1Q2TAM9 212 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 PPM1LQ5SGD2 360 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 LIN9Q5TKA1 542 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 SWSAP1Q6NVH7 229 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 ZNF589Q86UQ0 364 aaPredicted RBP7.16□□□□□ -1.26
LINC00396-201ENST00000411690 KBTBD6Q86V97 674 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 RNF168Q8IYW5 571 aaPredicted RBP7.16□□□□□ -1.26
LINC00396-201ENST00000411690 LRRC71Q8N4P6 559 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 GAB3Q8WWW8 586 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 ING5Q8WYH8 240 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 ELSPBP1Q96BH3 223 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 MCRS1Q96EZ8 462 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 MXRA8Q9BRK3 442 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 MKNK1Q9BUB5 465 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 CHST7Q9NS84 486 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 MARCH5Q9NX47 278 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 FNIP2Q9P278 1114 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 PIAS3Q9Y6X2 628 aa7.16□□□□□ -1.26
LINC00396-201ENST00000411690 MTCL1Q9Y4B5 1905 aaKnown RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 OIP5O43482 229 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 EFEMP2O95967 443 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 CCNE2O96020 404 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 POMCP01189 267 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 CAPNS1P04632 268 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 C8AP07357 584 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 RPL17P18621 184 aaKnown RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 SFPQP23246 707 aaKnown RBP eCLIP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 CCNE1P24864 410 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 HOXA6P31267 233 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 AFF1P51825 1210 aaKnown RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 FGD1P98174 961 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 CREMQ03060 361 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 ITGB3BPQ13352 177 aaPredicted RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 LRRC32Q14392 662 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 GRM2Q14416 872 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 USP41Q3LFD5 358 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 PABPC1LQ4VXU2 614 aaKnown RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 TANGO2Q6ICL3 276 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 MIS18BP1Q6P0N0 1132 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 AGMOQ6ZNB7 445 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 RIPOR1Q6ZS17 1223 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 GPR65Q8IYL9 337 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 LINC01465Q8N7H1 131 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 HNRNPLLQ8WVV9 542 aaKnown RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 EVI5LQ96CN4 794 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 LRIG1Q96JA1 1093 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 B3GALT6Q96L58 329 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 MBOAT7Q96N66 472 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 TRMT61BQ9BVS5 477 aaKnown RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 GCOM2Q9BZD3 368 aaPredicted RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 KRT23Q9C075 422 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 PSTPIP2Q9H939 334 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 RSAD1Q9HA92 442 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 AGO4Q9HCK5 861 aaKnown RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 ZNF334Q9HCZ1 680 aaPredicted RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 RBM12Q9NTZ6 932 aaKnown RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 GDE1Q9NZC3 331 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 DNMT3BQ9UBC3 853 aaKnown RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 FKBPLQ9UIM3 349 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 FBXW11Q9UKB1 542 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 KCNH3Q9ULD8 1083 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 PCDHA6Q9UN73 950 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 PIN4Q9Y237 131 aaKnown RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 MRPS23Q9Y3D9 190 aaKnown RBP7.15□□□□□ -1.26
LINC00396-201ENST00000411690 PCDHA8Q9Y5H6 950 aa7.15□□□□□ -1.26
LINC00396-201ENST00000411690 SHISA8B8ZZ34 492 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 ERVH48-1M5A8F1 160 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 CAVIN2O95810 425 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 ITGB7P26010 798 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 HOXA9P31269 272 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 HOXC13P31276 330 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 RDXP35241 583 aaKnown RBP7.14□□□□□ -1.27
LINC00396-201ENST00000411690 CDC42EP1Q00587 391 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 SEC23AQ15436 765 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 UBE2SQ16763 222 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 LARP1BQ659C4 914 aaKnown RBP7.14□□□□□ -1.27
LINC00396-201ENST00000411690 COLGALT2Q8IYK4 626 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 DEFB124Q8NES8 71 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 OTUD7AQ8TE49 926 aaPredicted RBP7.14□□□□□ -1.27
LINC00396-201ENST00000411690 LRRN4Q8WUT4 740 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 RRP36Q96EU6 259 aaKnown RBP7.14□□□□□ -1.27
LINC00396-201ENST00000411690 ZC3H10Q96K80 434 aaKnown RBP7.14□□□□□ -1.27
LINC00396-201ENST00000411690 COLEC11Q9BWP8 271 aa7.14□□□□□ -1.27
LINC00396-201ENST00000411690 INO80BQ9C086 356 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms