RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 GM2AP17900 193 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 ATP6V1C1P21283 382 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 RFC4P35249 363 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 SREBF1P36956 1147 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 FMO5P49326 533 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 CAV1Q03135 178 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 KCNC4Q03721 635 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 MYO1EQ12965 1108 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 PPP1R7Q15435 360 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 SKIDA1Q1XH10 827 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 SLC5A9Q2M3M2 681 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 NBPF20Q3BBV1 942 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 CCDC38Q502W7 563 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 ANKRD20A2Q5SQ80 823 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 C1orf220Q5T0J3 134 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 SOGA3Q5TF21 947 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 ANKRD20A1Q5TYW2 823 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 LRCH2Q5VUJ6 765 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 ANKRD20A3Q5VUR7 823 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 ANO7Q6IWH7 933 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 C1orf186Q6ZWK4 172 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 TAOK1Q7L7X3 1001 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 TAS1R3Q7RTX0 852 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 SPATA21Q7Z572 469 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 DAAM2Q86T65 1068 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 ERICH1Q86X53 443 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 CATSPER3Q86XQ3 398 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 ECHDC2Q86YB7 292 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 PALB2Q86YC2 1186 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 SLC13A5Q86YT5 568 aaPredicted RBP3.37□□□□□ -1.87
CUL3-204ENST00000409777 EGFL6Q8IUX8 553 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 AGGF1Q8N302 714 aaeCLIP3.37□□□□□ -1.873e-15■■■□□ 15
CUL3-204ENST00000409777 ZNF276Q8N554 614 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 SLC7A6OSQ96CW6 309 aaPredicted RBP3.37□□□□□ -1.87
CUL3-204ENST00000409777 C18orf8Q96DM3 657 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 CDK5RAP3Q96JB5 506 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 RMDN2Q96LZ7 410 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 CCDC28BQ9BUN5 200 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 FOXP3Q9BZS1 431 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 NYXQ9GZU5 481 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 RNPEPL1Q9HAU8 725 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 UBN1Q9NPG3 1134 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 CYP39A1Q9NYL5 469 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 SAMD15Q9P1V8 674 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 SEL1LQ9UBV2 794 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 APEX2Q9UBZ4 518 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 SYNPO2Q9UMS6 1093 aa3.37□□□□□ -1.87
CUL3-204ENST00000409777 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.37□□□□□ -1.87
CUL3-204ENST00000409777 COL11A2P13942 1736 aaPredicted RBP3.37□□□□□ -1.87
CUL3-204ENST00000409777 ZNF335Q9H4Z2 1342 aaPredicted RBP3.36□□□□□ -1.87
CUL3-204ENST00000409777 IGLV3-22A0A075B6J6 115 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 GOLGA6L10A0A0M3HER8 536 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 POTECB2RU33 542 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 EML1O00423 815 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 MEIS2O14770 477 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 RASGRF2O14827 1237 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 GRIN3BO60391 1043 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 HNRNPCL1O60812 293 aaKnown RBP3.36□□□□□ -1.87
CUL3-204ENST00000409777 ZBED4O75132 1171 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 ASMTLO95671 621 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 TTC4O95801 387 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 LDHBP07195 334 aaKnown RBP3.36□□□□□ -1.87
CUL3-204ENST00000409777 LDHCP07864 332 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 TPBGLP0DKB5 382 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 ITIH2P19823 946 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 CALB2P22676 271 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 RPL13P26373 211 aaKnown RBP3.36□□□□□ -1.87
CUL3-204ENST00000409777 POLD1P28340 1107 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 CASP4P49662 377 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 OCRLQ01968 901 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 KLF1Q13351 362 aaPredicted RBP3.36□□□□□ -1.87
CUL3-204ENST00000409777 E2F5Q15329 346 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 OR52E8Q6IFG1 317 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 MIGA2Q7L4E1 593 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 ZNF804AQ7Z570 1209 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 APBB1IPQ7Z5R6 666 aaPredicted RBP3.36□□□□□ -1.87
CUL3-204ENST00000409777 SFR1Q86XK3 245 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 MFN1Q8IWA4 741 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 SCUBE3Q8IX30 993 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 FAM71AQ8IYT1 594 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 ADGRF4Q8IZF3 695 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 ZNF444Q8N0Y2 327 aaPredicted RBP3.36□□□□□ -1.87
CUL3-204ENST00000409777 PLPP7Q8NBV4 271 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 LINC00116Q8NCU8 138 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 U2AF1L4Q8WU68 220 aaKnown RBP3.36□□□□□ -1.87
CUL3-204ENST00000409777 GLG1Q92896 1179 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 IFT74Q96LB3 600 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 FAM20AQ96MK3 541 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 SCLT1Q96NL6 688 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 AGPAT1Q99943 283 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 SH3GL3Q99963 347 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 HSD17B14Q9BPX1 270 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 ELAC2Q9BQ52 826 aaKnown RBP3.36□□□□□ -1.87
CUL3-204ENST00000409777 OCSTAMPQ9BR26 566 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 DHRS4Q9BTZ2 278 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.36□□□□□ -1.87
CUL3-204ENST00000409777 INTS2Q9H0H0 1204 aaKnown RBP3.36□□□□□ -1.87
CUL3-204ENST00000409777 DEFB129Q9H1M3 183 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 CPVLQ9H3G5 476 aa3.36□□□□□ -1.87
CUL3-204ENST00000409777 ST6GALNAC4Q9H4F1 302 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms