RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ATP1A1P05023 1023 aaKnown RBP15.18■□□□□ 0.02
LIMS2-206ENST00000409754 HARSP12081 509 aaKnown RBP15.18■□□□□ 0.02
LIMS2-206ENST00000409754 CST5P28325 142 aaPredicted RBP15.18■□□□□ 0.02
LIMS2-206ENST00000409754 AP3M2P53677 418 aa15.18■□□□□ 0.02
LIMS2-206ENST00000409754 GCNT1Q02742 428 aa15.18■□□□□ 0.02
LIMS2-206ENST00000409754 ATF7IP2Q5U623 682 aa15.18■□□□□ 0.02
LIMS2-206ENST00000409754 TDRD10Q5VZ19 366 aaKnown RBP15.18■□□□□ 0.02
LIMS2-206ENST00000409754 ANKRD7Q92527 254 aa15.18■□□□□ 0.02
LIMS2-206ENST00000409754 KAT5Q92993 513 aa15.18■□□□□ 0.02
LIMS2-206ENST00000409754 PACSIN1Q9BY11 444 aa15.18■□□□□ 0.02
LIMS2-206ENST00000409754 AKT3Q9Y243 479 aa15.18■□□□□ 0.02
LIMS2-206ENST00000409754 TNFSF13BQ9Y275 285 aa15.18■□□□□ 0.02
LIMS2-206ENST00000409754 CAPN15O75808 1086 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 F2P00734 622 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 TFRCP02786 760 aaKnown RBP15.17■□□□□ 0.02
LIMS2-206ENST00000409754 H2AFZP0C0S5 128 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 TNFAIP3P21580 790 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 NAA30Q147X3 362 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-206ENST00000409754 SURF1Q15526 300 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 WDR44Q5JSH3 913 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 MARCH8Q5T0T0 291 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 H2AFVQ71UI9 128 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 ZBTB33Q86T24 672 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 MAP7D2Q96T17 732 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 AGPAT1Q99943 283 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 MINDY3Q9H8M7 445 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 CPSF3Q9UKF6 684 aaKnown RBP15.17■□□□□ 0.02
LIMS2-206ENST00000409754 SAR1BQ9Y6B6 198 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 PTPRJQ12913 1337 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 DNM1LO00429 736 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 ENC1O14682 589 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 ZEB2O60315 1214 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 HLA-DRAP01903 254 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 C6orf222P0C671 652 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-206ENST00000409754 BIRC3Q13489 604 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 FSCN1Q16658 493 aaKnown RBP15.17■□□□□ 0.02
LIMS2-206ENST00000409754 LMBRD2Q68DH5 695 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-206ENST00000409754 SRGAP1Q7Z6B7 1085 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 WDR49Q8IV35 697 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 GLYCTKQ8IVS8 523 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 PAWRQ96IZ0 340 aaKnown RBP15.17■□□□□ 0.02
LIMS2-206ENST00000409754 ZNF668Q96K58 619 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-206ENST00000409754 C1orf112Q9NSG2 853 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 EVPLQ92817 2033 aa15.17■□□□□ 0.02
LIMS2-206ENST00000409754 A0A087WZ62 844 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 A0A0A6YYK5 440 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-206ENST00000409754 B4GALT5O43286 388 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 BUB1O43683 1085 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 VNN1O95497 513 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 PRLRP16471 622 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 TNFSF9P41273 254 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 PIK3CAP42336 1068 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 KCNA10Q16322 511 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 AMHR2Q16671 573 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 ZNF568Q3ZCX4 644 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 SEZ6Q53EL9 994 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 ZNF410Q86VK4 478 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 ZNF710Q8N1W2 664 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 UBXN4Q92575 508 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 TATDN2Q93075 761 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 FDXACB1Q9BRP7 624 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-206ENST00000409754 PCDH10Q9P2E7 1040 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.16■□□□□ 0.02
LIMS2-206ENST00000409754 PHF24Q9UPV7 400 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 PCDHGC5Q9Y5F6 944 aa15.16■□□□□ 0.02
LIMS2-206ENST00000409754 V9GYY5 206 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-206ENST00000409754 GRIN2DO15399 1336 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 NRCAMQ92823 1304 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 VTNP04004 478 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 IQCF3P0C7M6 154 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 USP8P40818 1118 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 CPT1AP50416 773 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 NAP1L1P55209 391 aaKnown RBP15.15■□□□□ 0.02
LIMS2-206ENST00000409754 TUBB4BP68371 445 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 ELF2Q15723 593 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 IFI16Q16666 785 aaKnown RBP15.15■□□□□ 0.02
LIMS2-206ENST00000409754 TMEM132AQ24JP5 1023 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 ERCC6LQ2NKX8 1250 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 EEF1DP3Q658K8 133 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 RSRC2Q7L4I2 434 aaKnown RBP15.15■□□□□ 0.02
LIMS2-206ENST00000409754 KIAA0319LQ8IZA0 1049 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 ANKLE1Q8NAG6 615 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 EPS8L1Q8TE68 723 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 PPP1R13LQ8WUF5 828 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 KAT2BQ92831 832 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 PI4K2AQ9BTU6 479 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 AP5M1Q9H0R1 490 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 CDT1Q9H211 546 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.15■□□□□ 0.02
LIMS2-206ENST00000409754 HDAC6Q9UBN7 1215 aa15.15■□□□□ 0.02
LIMS2-206ENST00000409754 NOCTQ9UK39 431 aaKnown RBP15.15■□□□□ 0.02
LIMS2-206ENST00000409754 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
LIMS2-206ENST00000409754 ASGR1P07306 291 aa15.14■□□□□ 0.01
LIMS2-206ENST00000409754 TMEM253P0C7T8 217 aa15.14■□□□□ 0.01
LIMS2-206ENST00000409754 SMIM10L2AP0DMW4 78 aa15.14■□□□□ 0.01
LIMS2-206ENST00000409754 SMIM10L2BP0DMW5 78 aa15.14■□□□□ 0.01
LIMS2-206ENST00000409754 MCF2P10911 925 aa15.14■□□□□ 0.01
LIMS2-206ENST00000409754 ACLYP53396 1101 aa15.14■□□□□ 0.01
LIMS2-206ENST00000409754 CHMP4BP1P59074 171 aa15.14■□□□□ 0.01
LIMS2-206ENST00000409754 CDC42EP1Q00587 391 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms