RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 XYLBO75191 536 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 BMP15O95972 392 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 C8AP07357 584 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 PROZP22891 400 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 ANKS3Q6ZW76 656 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 RTL10Q7L3V2 364 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 TAS1R3Q7RTX0 852 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 CEP120Q8N960 986 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 SNX27Q96L92 541 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 MYADMQ96S97 322 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 MTRRQ9UBK8 725 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 MYH11P35749 1972 aa16.15■□□□□ 0.18
CBX3-203ENST00000409747 TOM1L1O75674 476 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 POU2F2P09086 479 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 KCNE1P15382 129 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 OSTNP61366 133 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 RAB33AQ14088 237 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 ALKAL1Q6UXT8 129 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 TMEM105Q8N8V8 129 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 PNMA5Q96PV4 448 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 CNTN3Q9P232 1028 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 LARSQ9P2J5 1176 aaKnown RBP16.14■□□□□ 0.17
CBX3-203ENST00000409747 BACE2Q9Y5Z0 518 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 TRIP11Q15643 1979 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 SFI1A8K8P3 1242 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 CD2BP2O95400 341 aaKnown RBP16.14■□□□□ 0.17
CBX3-203ENST00000409747 PLA2G4BP0C869 781 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 LAMP2P13473 410 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 SCP2P22307 547 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 FSHRP23945 695 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 SLC12A3P55017 1021 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 RAD51AP2Q09MP3 1159 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 NOLC1Q14978 699 aaKnown RBP eCLIP16.14■□□□□ 0.176e-7■■■□□ 15.8
CBX3-203ENST00000409747 UVSSAQ2YD98 709 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 TMEM119Q4V9L6 283 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 LARP1BQ659C4 914 aaKnown RBP16.14■□□□□ 0.17
CBX3-203ENST00000409747 ZPBP2Q6X784 338 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 BRAPQ7Z569 592 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 TMEM161BQ8NDZ6 487 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 FLCNQ8NFG4 579 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 CALML4Q96GE6 196 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 TBC1D32Q96NH3 1257 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 GOLGA2P5Q9HBQ8 144 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 ANKFY1Q9P2R3 1169 aa16.14■□□□□ 0.17
CBX3-203ENST00000409747 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.14■□□□□ 0.17
CBX3-203ENST00000409747 CITO14578 2027 aa16.13■□□□□ 0.17
CBX3-203ENST00000409747 PODXLO00592 558 aa16.13■□□□□ 0.17
CBX3-203ENST00000409747 MAPTP10636 758 aaKnown RBP16.13■□□□□ 0.17
CBX3-203ENST00000409747 SRFP11831 508 aa16.13■□□□□ 0.17
CBX3-203ENST00000409747 HARSP12081 509 aaKnown RBP16.13■□□□□ 0.17
CBX3-203ENST00000409747 TKTP29401 623 aaKnown RBP16.13■□□□□ 0.17
CBX3-203ENST00000409747 RPL9P32969 192 aaKnown RBP16.13■□□□□ 0.17
CBX3-203ENST00000409747 OR1D2P34982 312 aa16.13■□□□□ 0.17
CBX3-203ENST00000409747 UBA7P41226 1012 aa16.13■□□□□ 0.17
CBX3-203ENST00000409747 AXDND1Q5T1B0 1012 aaPredicted RBP16.13■□□□□ 0.17
CBX3-203ENST00000409747 GRASPQ7Z6J2 395 aaPredicted RBP16.13■□□□□ 0.17
CBX3-203ENST00000409747 SLC7A14Q8TBB6 771 aa16.13■□□□□ 0.17
CBX3-203ENST00000409747 ATOH1Q92858 354 aaPredicted RBP16.13■□□□□ 0.17
CBX3-203ENST00000409747 WNT16Q9UBV4 365 aa16.13■□□□□ 0.17
CBX3-203ENST00000409747 ODF2LQ9ULJ1 636 aa16.13■□□□□ 0.17
CBX3-203ENST00000409747 CDY1Q9Y6F8 540 aa16.13■□□□□ 0.17
CBX3-203ENST00000409747 ABLIM1O14639 778 aa16.12■□□□□ 0.17
CBX3-203ENST00000409747 SYN3O14994 580 aa16.12■□□□□ 0.17
CBX3-203ENST00000409747 CLDN3O15551 220 aa16.12■□□□□ 0.17
CBX3-203ENST00000409747 SIX5Q8N196 739 aa16.12■□□□□ 0.17
CBX3-203ENST00000409747 SLC44A3Q8N4M1 653 aa16.12■□□□□ 0.17
CBX3-203ENST00000409747 C3orf58Q8NDZ4 430 aa16.12■□□□□ 0.17
CBX3-203ENST00000409747 PLIN2Q99541 437 aa16.12■□□□□ 0.17
CBX3-203ENST00000409747 RTP3Q9BQQ7 232 aa16.12■□□□□ 0.17
CBX3-203ENST00000409747 POLIQ9UNA4 740 aa16.12■□□□□ 0.17
CBX3-203ENST00000409747 NUB1Q9Y5A7 615 aa16.12■□□□□ 0.17
CBX3-203ENST00000409747 DOCK8Q8NF50 2099 aa16.12■□□□□ 0.17
CBX3-203ENST00000409747 CCL16O15467 120 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 ADAM12O43184 909 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 AOC1P19801 751 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 RFX1P22670 979 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 MATR3P43243 847 aaKnown RBP eCLIP16.11■□□□□ 0.17
CBX3-203ENST00000409747 SOX4Q06945 474 aaPredicted RBP16.11■□□□□ 0.17
CBX3-203ENST00000409747 CWF19L1Q69YN2 538 aaKnown RBP16.11■□□□□ 0.17
CBX3-203ENST00000409747 CD300LGQ6UXG3 332 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 RSAD2Q8WXG1 361 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 BICD1Q96G01 975 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 ZMAT2Q96NC0 199 aaKnown RBP16.11■□□□□ 0.17
CBX3-203ENST00000409747 CDH7Q9ULB5 785 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 USP34Q70CQ2 3546 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 ANHXE9PGG2 379 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 H0Y858 1186 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 H7C4K7 107 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 NARSO43776 548 aaKnown RBP16.11■□□□□ 0.17
CBX3-203ENST00000409747 CFHP08603 1231 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 ABCD1P33897 745 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 LONP1P36776 959 aaKnown RBP16.11■□□□□ 0.17
CBX3-203ENST00000409747 BRCC3P46736 316 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 NCKAP1LP55160 1127 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 MCL1Q07820 350 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 HTR4Q13639 388 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 KYAT1Q16773 422 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 SLC8B1Q6J4K2 584 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 MTSS1LQ765P7 747 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 RASSF8Q8NHQ8 419 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms