RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 STX1AQ16623 288 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 RSPO4Q2I0M5 234 aaPredicted RBP14□□□□□ -0.17
CHRNA1-205ENST00000409542 EARS2Q5JPH6 523 aaKnown RBP14□□□□□ -0.17
CHRNA1-205ENST00000409542 NCAPH2Q6IBW4 605 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 NOTUMQ6P988 496 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 ELMSAN1Q6PJG2 1045 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 IFNLR1Q8IU57 520 aaPredicted RBP14□□□□□ -0.17
CHRNA1-205ENST00000409542 FSIP1Q8NA03 581 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 ITFG1Q8TB96 612 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 HASPINQ8TF76 798 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 CLSTN3Q9BQT9 956 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 PPME1Q9Y570 386 aa14□□□□□ -0.17
CHRNA1-205ENST00000409542 CCL16O15467 120 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 DKC1O60832 514 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 SLITRK3O94933 977 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 NPTXRO95502 500 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 C1RP00736 705 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 CD72P21854 359 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 IGFBP6P24592 240 aaPredicted RBP13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 STK38Q15208 465 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 ZC3H14Q6PJT7 736 aaKnown RBP13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 POTEHQ6S545 545 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 KRT25Q7Z3Z0 450 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 EXOC8Q8IYI6 725 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 TRIM22Q8IYM9 498 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 OXER1Q8TDS5 423 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 CCDC51Q96ER9 411 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 DDX23Q9BUQ8 820 aaKnown RBP13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 FBXW11Q9UKB1 542 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 PCDHA7Q9UN72 937 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 PATJQ8NI35 1801 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 KANSL1LA0AUZ9 987 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 FAM205CA6NFA0 338 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 TADA2AO75478 443 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 KRT37O76014 449 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 GLRA2P23416 452 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 ARL2P36404 184 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 ZNF165P49910 485 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 SLC44A4Q53GD3 710 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 PPP4R3AQ6IN85 833 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 OTUD6AQ7L8S5 288 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 NEK8Q86SG6 692 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 LUZP1Q86V48 1076 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 TPH2Q8IWU9 490 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 GPR65Q8IYL9 337 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 FMR1NBQ8N0W7 255 aaPredicted RBP13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 LNX1Q8TBB1 728 aaPredicted RBP13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 FGF13Q92913 245 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 PHF20Q9BVI0 1012 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 ZSWIM4Q9H7M6 989 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 HCFC1R1Q9NWW0 138 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 PARP2Q9UGN5 583 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 CDH7Q9ULB5 785 aa13.99□□□□□ -0.17
CHRNA1-205ENST00000409542 CASTOR2A6NHX0 329 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 TTLL13PA6NNM8 815 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 SPTLC2O15270 562 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 CCNT1O60563 726 aaKnown RBP13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 MXD4Q14582 209 aaPredicted RBP13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 UBXN2BQ14CS0 331 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 MLF2Q15773 248 aaPredicted RBP13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 GALNT17Q6IS24 598 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 PIK3AP1Q6ZUJ8 805 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 WASF1Q92558 559 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 CNTNAP3BQ96NU0 1288 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 KXD1Q9BQD3 176 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 CNTNAP3Q9BZ76 1288 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 TRIM6Q9C030 488 aaPredicted RBP13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 SPATA6Q9NWH7 488 aaPredicted RBP13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 CLIC4Q9Y696 253 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 VWA8A3KMH1 1905 aa13.98□□□□□ -0.17
CHRNA1-205ENST00000409542 CCDC194A0A1B0GVG4 234 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 FAM170BA6NMN3 283 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 KIF4AO95239 1232 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 C8AP07357 584 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 CDC25BP30305 580 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 CSTF1Q05048 431 aaKnown RBP13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 GRIK3Q13003 919 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 HSP90AA2PQ14568 343 aaPredicted RBP13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 SF3A1Q15459 793 aaKnown RBP13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 VARS2Q5ST30 1063 aaKnown RBP13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 SARM1Q6SZW1 724 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 CEP57Q86XR8 500 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 SHDQ96IW2 340 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 EIF2AK1Q9BQI3 630 aaKnown RBP13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 PLA2G2FQ9BZM2 168 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 DNAJC25Q9H1X3 360 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 ANO10Q9NW15 660 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 DNMT3BQ9UBC3 853 aaKnown RBP13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 POLIQ9UNA4 740 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 USP20Q9Y2K6 914 aa13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 ZFP37Q9Y6Q3 630 aaPredicted RBP13.97□□□□□ -0.17
CHRNA1-205ENST00000409542 A0A1B0GUA9 196 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 SHISA7A6NL88 538 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 PTGESO14684 152 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 TBX3O15119 743 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 LAMTOR5O43504 91 aa13.96□□□□□ -0.17
CHRNA1-205ENST00000409542 U2AF2P26368 475 aaKnown RBP eCLIP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms