RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 LARSQ9P2J5 1176 aaKnown RBP21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 KCNG1Q9UIX4 513 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 SORCS3Q9UPU3 1222 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 TMEM189-UBE2V1I3L0A0 370 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 I3L4J1 428 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 N4BP1O75113 896 aaKnown RBP21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 C1RP00736 705 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 MARCKSP29966 332 aaPredicted RBP21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 NCKAP1LP55160 1127 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 ELAVL2Q12926 359 aaKnown RBP21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 HAUS6Q7Z4H7 955 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 PLCD3Q8N3E9 789 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 RASSF8Q8NHQ8 419 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 SMG7Q92540 1137 aaKnown RBP21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 RAD54LQ92698 747 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 UROC1Q96N76 676 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 HAPLN2Q9GZV7 340 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 WDR6Q9NNW5 1121 aaKnown RBP21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 ODF2LQ9ULJ1 636 aa21.11■□□□□ 0.97
SMARCB1-204ENST00000407422 FGFR3P22607 806 aa21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 BRCC3P46736 316 aa21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 CEBPZQ03701 1054 aaKnown RBP21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 MTMR3Q13615 1198 aa21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 NOLC1Q14978 699 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 ZPBP2Q6X784 338 aa21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 OTOP3Q7RTS5 596 aa21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 C18orf25Q96B23 403 aaPredicted RBP21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 ACSF2Q96CM8 615 aaPredicted RBP21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 INTS4Q96HW7 963 aaKnown RBP21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 CNTN3Q9P232 1028 aa21.1■□□□□ 0.97
SMARCB1-204ENST00000407422 PAPLNO95428 1278 aa21.09■□□□□ 0.97
SMARCB1-204ENST00000407422 KCNE1P15382 129 aa21.09■□□□□ 0.97
SMARCB1-204ENST00000407422 SLC10A6Q3KNW5 377 aa21.09■□□□□ 0.97
SMARCB1-204ENST00000407422 MYCT1Q8N699 235 aa21.09■□□□□ 0.97
SMARCB1-204ENST00000407422 RHOBTB2Q9BYZ6 727 aa21.09■□□□□ 0.97
SMARCB1-204ENST00000407422 CCSER1Q9C0I3 900 aa21.09■□□□□ 0.97
SMARCB1-204ENST00000407422 FBXO2Q9UK22 296 aaPredicted RBP21.09■□□□□ 0.97
SMARCB1-204ENST00000407422 FBXW11Q9UKB1 542 aa21.09■□□□□ 0.97
SMARCB1-204ENST00000407422 KMT2EQ8IZD2 1858 aa21.09■□□□□ 0.97
SMARCB1-204ENST00000407422 CLDN3O15551 220 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 FAM13AO94988 1023 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 PDGFBP01127 241 aaPredicted RBP21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 TKTP29401 623 aaKnown RBP21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 ZNF131P52739 623 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 MCL1Q07820 350 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 RSPO2Q6UXX9 243 aaPredicted RBP21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 CYP26C1Q6V0L0 522 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 FBXL6Q8N531 539 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 CLIC6Q96NY7 704 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 PRKD2Q9BZL6 878 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 SLC38A7Q9NVC3 462 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 ZDHHC7Q9NXF8 308 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 MTMR6Q9Y217 621 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 CLUHO75153 1309 aa21.08■□□□□ 0.97
SMARCB1-204ENST00000407422 K7ELQ4 463 aaPredicted RBP21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 PODXLO00592 558 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 ZMYND10O75800 440 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 KRT18P05783 430 aaKnown RBP21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 MATR3P43243 847 aaKnown RBP eCLIP21.07■□□□□ 0.965e-9■■■■□ 20.1
SMARCB1-204ENST00000407422 UBALD2Q8IYN6 164 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 TMEM130Q8N3G9 435 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 LARP4BQ92615 738 aaKnown RBP21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 BICD1Q96G01 975 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 DDX27Q96GQ7 796 aaKnown RBP21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 ZHX3Q9H4I2 956 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 PIDD1Q9HB75 910 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 PARVGQ9HBI0 331 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 TBX20Q9UMR3 447 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 H0YCG3 227 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 K7ENM7 598 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 CXCL8P10145 99 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 OR1D2P34982 312 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 DDIT3P35638 169 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 IER5LQ5T953 404 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 PDXDC1Q6P996 788 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 SUGP1Q8IWZ8 645 aaKnown RBP21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 KCNN1Q92952 543 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 MTRRQ9UBK8 725 aa21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 SRPRBQ9Y5M8 271 aaKnown RBP21.07■□□□□ 0.96
SMARCB1-204ENST00000407422 TRAPPC3O43617 180 aa21.06■□□□□ 0.96
SMARCB1-204ENST00000407422 TRAK2O60296 914 aa21.06■□□□□ 0.96
SMARCB1-204ENST00000407422 GBP2P32456 591 aaPredicted RBP21.06■□□□□ 0.96
SMARCB1-204ENST00000407422 SPAG1Q07617 926 aa21.06■□□□□ 0.96
SMARCB1-204ENST00000407422 MYADMQ96S97 322 aa21.06■□□□□ 0.96
SMARCB1-204ENST00000407422 FIZ1Q96SL8 496 aa21.06■□□□□ 0.96
SMARCB1-204ENST00000407422 KCNK12Q9HB15 430 aa21.06■□□□□ 0.96
SMARCB1-204ENST00000407422 CDY1Q9Y6F8 540 aa21.06■□□□□ 0.96
SMARCB1-204ENST00000407422 TNFSF9P41273 254 aa21.05■□□□□ 0.96
SMARCB1-204ENST00000407422 LIG4P49917 911 aa21.05■□□□□ 0.96
SMARCB1-204ENST00000407422 VCPP55072 806 aaKnown RBP21.05■□□□□ 0.96
SMARCB1-204ENST00000407422 RAB33AQ14088 237 aa21.05■□□□□ 0.96
SMARCB1-204ENST00000407422 ZBTB41Q5SVQ8 909 aa21.05■□□□□ 0.96
SMARCB1-204ENST00000407422 STAMQ92783 540 aa21.05■□□□□ 0.96
SMARCB1-204ENST00000407422 USP28Q96RU2 1077 aa21.05■□□□□ 0.96
SMARCB1-204ENST00000407422 TUBGCP4Q9UGJ1 667 aa21.05■□□□□ 0.96
SMARCB1-204ENST00000407422 PIEZO1Q92508 2521 aa21.05■□□□□ 0.96
SMARCB1-204ENST00000407422 HNRNPDLO14979 420 aaKnown RBP21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 TBCAO75347 108 aaKnown RBP21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 C8AP07357 584 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms