RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 TRIP11Q15643 1979 aa6.88□□□□□ -1.31
RPA3-204ENST00000406109 GON4LQ3T8J9 2241 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 VPS37CA5D8V6 355 aaPredicted RBP6.87□□□□□ -1.31
RPA3-204ENST00000406109 DDX11L8A8MPP1 907 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 EML1O00423 815 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 NRG2O14511 850 aaPredicted RBP6.87□□□□□ -1.31
RPA3-204ENST00000406109 ADAM12O43184 909 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 LAMTOR5O43504 91 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 SRGAP2CP0DJJ0 459 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 U2AF2P26368 475 aaKnown RBP eCLIP6.87□□□□□ -1.31
RPA3-204ENST00000406109 TARSP26639 723 aaKnown RBP6.87□□□□□ -1.31
RPA3-204ENST00000406109 MLH1P40692 756 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 TXKP42681 527 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 RPS9P46781 194 aaKnown RBP6.87□□□□□ -1.31
RPA3-204ENST00000406109 SCNN1GP51170 649 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 LMNB2Q03252 620 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 PRKCQQ04759 706 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 LAMTOR4Q0VGL1 99 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 MTAPQ13126 283 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 UBXN2BQ14CS0 331 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 AMHR2Q16671 573 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 ST3GAL2Q16842 350 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 USP41Q3LFD5 358 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 RTP2Q5QGT7 225 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 FUT10Q6P4F1 479 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 RSPO2Q6UXX9 243 aaPredicted RBP6.87□□□□□ -1.31
RPA3-204ENST00000406109 MIER3Q7Z3K6 550 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 SRGAP1Q7Z6B7 1085 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 GLYCTKQ8IVS8 523 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 RABGGTAQ92696 567 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 HAS1Q92839 578 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 TMEM143Q96AN5 459 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 INTS4Q96HW7 963 aaKnown RBP6.87□□□□□ -1.31
RPA3-204ENST00000406109 CLSTN3Q9BQT9 956 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 PAAF1Q9BRP4 392 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 PLA2G2FQ9BZM2 168 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 DHX33Q9H6R0 707 aaKnown RBP6.87□□□□□ -1.31
RPA3-204ENST00000406109 PIDD1Q9HB75 910 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 UBN1Q9NPG3 1134 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 CACNG4Q9UBN1 327 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 FBXW11Q9UKB1 542 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 CDV3Q9UKY7 258 aaKnown RBP6.87□□□□□ -1.31
RPA3-204ENST00000406109 PCDHA12Q9UN75 941 aa6.87□□□□□ -1.31
RPA3-204ENST00000406109 WNT7AO00755 349 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 ZBTB39O15060 712 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 TBX3O15119 743 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 TBC1D4O60343 1298 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 NEMFO60524 1076 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 TSPAN1O60635 241 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 ITGA4P13612 1032 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 PDCP20941 246 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 IGFBP6P24592 240 aaPredicted RBP6.86□□□□□ -1.31
RPA3-204ENST00000406109 MAGEA9P43362 315 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 TOB1P50616 345 aaPredicted RBP6.86□□□□□ -1.31
RPA3-204ENST00000406109 NBR1Q14596 966 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 TTC38Q5R3I4 469 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 ZBTB41Q5SVQ8 909 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 NCAPH2Q6IBW4 605 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 ELMSAN1Q6PJG2 1045 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 ADGRD1Q6QNK2 874 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 PRSS55Q6UWB4 352 aaPredicted RBP6.86□□□□□ -1.31
RPA3-204ENST00000406109 SLFN12Q8IYM2 578 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 LNX1Q8TBB1 728 aaPredicted RBP6.86□□□□□ -1.31
RPA3-204ENST00000406109 CPB2Q96IY4 423 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 KXD1Q9BQD3 176 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 CXCL16Q9H2A7 254 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 TMEM60Q9H2L4 133 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 NXF3Q9H4D5 531 aaKnown RBP6.86□□□□□ -1.31
RPA3-204ENST00000406109 TTC12Q9H892 705 aaPredicted RBP6.86□□□□□ -1.31
RPA3-204ENST00000406109 KCNMB3Q9NPA1 279 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.86□□□□□ -1.31
RPA3-204ENST00000406109 HCFC1R1Q9NWW0 138 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 ADAM28Q9UKQ2 775 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 VAV3Q9UKW4 847 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 USP18Q9UMW8 372 aa6.86□□□□□ -1.31
RPA3-204ENST00000406109 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.86□□□□□ -1.31
RPA3-204ENST00000406109 ATG2BQ96BY7 2078 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 ARHGAP33O14559 1287 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 SLC30A4O14863 429 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 CCL16O15467 120 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 GDF9O60383 454 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 POU2F2P09086 479 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 HNRNPA1P09651 372 aaKnown RBP eCLIP6.85□□□□□ -1.31
RPA3-204ENST00000406109 SYT1P21579 422 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 AKAP5P24588 427 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 HOXA9P31269 272 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 TRAPPC10P48553 1259 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 PTENP60484 403 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 PSMC5P62195 406 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 SPEM2Q0P670 501 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 PTGDRQ13258 359 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 PPP2R5CQ13362 524 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 EPHA7Q15375 998 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 NAB2Q15742 525 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 SLC5A9Q2M3M2 681 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 PPM1JQ5JR12 505 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 TPRG1Q6ZUI0 275 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 MTSS1LQ765P7 747 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 FERMT3Q86UX7 667 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 TPH2Q8IWU9 490 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms