RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ZC3H11AO75152 810 aaKnown RBP eCLIP8.17□□□□□ -1.19e-6■■■■□ 20.6
USP16-204ENST00000399976 PSMC2P35998 433 aaKnown RBP8.17□□□□□ -1.1
USP16-204ENST00000399976 RAD51AP2Q09MP3 1159 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 PAK1Q13153 545 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 BMS1Q14692 1282 aaKnown RBP8.17□□□□□ -1.1
USP16-204ENST00000399976 STX1AQ16623 288 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 UPP1Q16831 310 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 TMEM184AQ6ZMB5 413 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.17□□□□□ -1.1
USP16-204ENST00000399976 LRRC55Q6ZSA7 311 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 TRMT1LQ7Z2T5 733 aaKnown RBP8.17□□□□□ -1.1
USP16-204ENST00000399976 ENOX1Q8TC92 643 aaKnown RBP8.17□□□□□ -1.1
USP16-204ENST00000399976 ZBED2Q9BTP6 218 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 FGFBP2Q9BYJ0 223 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 NRDE2Q9H7Z3 1164 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 RXFP1Q9HBX9 757 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 SLC39A2Q9NP94 309 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 GDAP2Q9NXN4 497 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 SNTG2Q9NY99 539 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 DSEQ9UL01 958 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 COQ4Q9Y3A0 265 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 GTPBP10A4D1E9 387 aaKnown RBP8.16□□□□□ -1.1
USP16-204ENST00000399976 TBKBP1A7MCY6 615 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 CETN3O15182 167 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 TRAPPC3O43617 180 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 GALTP07902 379 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 SMARCB1Q12824 385 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 SNRNP35Q16560 246 aaKnown RBP8.16□□□□□ -1.1
USP16-204ENST00000399976 KCNT2Q6UVM3 1135 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 CXorf38Q8TB03 319 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 HELQQ8TDG4 1101 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 MRPL38Q96DV4 380 aaKnown RBP8.16□□□□□ -1.1
USP16-204ENST00000399976 IGSF21Q96ID5 467 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 FUCA2Q9BTY2 467 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 SEMA6BQ9H3T3 888 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 ZHX3Q9H4I2 956 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 SLC28A3Q9HAS3 691 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 FRMD4BQ9Y2L6 1034 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 BMP6P22004 513 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 FXR1P51114 621 aaKnown RBP eCLIP8.16□□□□□ -1.1
USP16-204ENST00000399976 TMEM132DQ14C87 1099 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 TMEM132AQ24JP5 1023 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 EPC2Q52LR7 807 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 PPP2R2DQ66LE6 453 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 STAMQ92783 540 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 JAKMIP2Q96AA8 810 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 ZBP1Q9H171 429 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 CHST7Q9NS84 486 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 INTS13Q9NVM9 706 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 RBAKQ9NYW8 714 aaPredicted RBP8.16□□□□□ -1.1
USP16-204ENST00000399976 BACE2Q9Y5Z0 518 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 SF3B1O75533 1304 aaKnown RBP eCLIP8.16□□□□□ -1.12e-7■■■■■ 53.5
USP16-204ENST00000399976 LILRB3O75022 631 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 SOD2P04179 222 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 ALDH2P05091 517 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 FGFR3P22607 806 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 MLH1P40692 756 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 BCAR1P56945 870 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 PARD3BQ8TEW8 1205 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 SUSD3Q96L08 255 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 FAM193BQ96PV7 902 aaPredicted RBP8.16□□□□□ -1.1
USP16-204ENST00000399976 PPP1R16BQ96T49 567 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 NAT10Q9H0A0 1025 aaKnown RBP8.16□□□□□ -1.1
USP16-204ENST00000399976 NKX2-4Q9H2Z4 354 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 ZNF576Q9H609 170 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 MARCH5Q9NX47 278 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 PCDHB8Q9UN66 801 aa8.16□□□□□ -1.1
USP16-204ENST00000399976 CA3P07451 260 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 CTSAP10619 480 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 EPB41P11171 864 aaKnown RBP8.15□□□□□ -1.1
USP16-204ENST00000399976 DSG1Q02413 1049 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 KRT17Q04695 432 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 KCNA1Q09470 495 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 MRPL58Q14197 206 aaKnown RBP8.15□□□□□ -1.1
USP16-204ENST00000399976 SV2CQ496J9 727 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 PPFIBP1Q86W92 1011 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 TMEM86AQ8N2M4 240 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 C2orf15Q8WU43 125 aaKnown RBP8.15□□□□□ -1.1
USP16-204ENST00000399976 ANKRD36BP1Q96IX9 119 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 ZBTB45Q96K62 511 aaPredicted RBP8.15□□□□□ -1.1
USP16-204ENST00000399976 GAD1Q99259 594 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 CBWD1Q9BRT8 395 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 TCHPQ9BT92 498 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 ANKFY1Q9P2R3 1169 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 DPP7Q9UHL4 492 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 GDAQ9Y2T3 454 aa8.15□□□□□ -1.1
USP16-204ENST00000399976 LACTBL1A8MY62 500 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 FGFR1P11362 822 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 EEF1GP26641 437 aaKnown RBP8.15□□□□□ -1.11
USP16-204ENST00000399976 ALDH7A1P49419 539 aaKnown RBP8.15□□□□□ -1.11
USP16-204ENST00000399976 SPAG1Q07617 926 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 BFSP1Q12934 665 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 DUOXA2Q1HG44 320 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 MICALL1Q8N3F8 863 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 TOP6BLQ8N6T0 577 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 PIK3R5Q8WYR1 880 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 PPP2R3CQ969Q6 453 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 DUSP9Q99956 384 aaKnown RBP8.15□□□□□ -1.11
USP16-204ENST00000399976 RNF39Q9H2S5 420 aa8.15□□□□□ -1.11
USP16-204ENST00000399976 PUF60Q9UHX1 559 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms