RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TBX20Q9UMR3 447 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 USTQ9Y2C2 406 aa16.26■□□□□ 0.19
SMIM11A-203ENST00000399299 FAM86C2PA6NEL3 165 aa16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 HNRNPDLO14979 420 aaKnown RBP16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 TRAPPC3O43617 180 aa16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 B3GAT3O94766 335 aa16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 HARSP12081 509 aaKnown RBP16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 GTF2BQ00403 316 aa16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 SOX4Q06945 474 aaPredicted RBP16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 KYAT1Q16773 422 aa16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 LILRA6Q6PI73 481 aa16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 CCDC73Q6ZRK6 1079 aa16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 MAP4K3Q8IVH8 894 aa16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 LINC00301Q8NCQ3 95 aa16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 LNX1Q8TBB1 728 aaPredicted RBP16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 EDAQ92838 391 aa16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 ZNF396Q96N95 335 aaPredicted RBP16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 ZMAT2Q96NC0 199 aaKnown RBP16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 GOLGA2P5Q9HBQ8 144 aa16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.25■□□□□ 0.19
SMIM11A-203ENST00000399299 TECTAO75443 2155 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 MEFVO15553 781 aaPredicted RBP16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 TGM5O43548 720 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 HSP90AA1P07900 732 aaKnown RBP16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 CLTAP09496 248 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 WEE2P0C1S8 567 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 FGFR3P22607 806 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 RPL9P32969 192 aaKnown RBP16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 LIG4P49917 911 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 STK38Q15208 465 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 PSMD5Q16401 504 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 SLC10A6Q3KNW5 377 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 KANK3Q6NY19 840 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 PRSS55Q6UWB4 352 aaPredicted RBP16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 CD300LGQ6UXG3 332 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 SV2BQ7L1I2 683 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 C3orf58Q8NDZ4 430 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 HAPLN2Q9GZV7 340 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 PLEKHA5Q9HAU0 1116 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 SEL1LQ9UBV2 794 aa16.24■□□□□ 0.19
SMIM11A-203ENST00000399299 C2CD4DB7Z1M9 353 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 SPTLC2O15270 562 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 FAM189A1O60320 539 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 PPP6R2O75170 966 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 YEATS4O95619 227 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 RPL17P18621 184 aaKnown RBP16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 MATR3P43243 847 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 CCDC149Q6ZUS6 474 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 CEP57Q86XR8 500 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 PALB2Q86YC2 1186 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 ZDHHC14Q8IZN3 488 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 DDX12PQ92771 950 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 HVCN1Q96D96 273 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 TSPAN18Q96SJ8 248 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 CLSTN3Q9BQT9 956 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 ZHX3Q9H4I2 956 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 TSHZ2Q9NRE2 1034 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 ZDHHC7Q9NXF8 308 aa16.23■□□□□ 0.19
SMIM11A-203ENST00000399299 A0A0B4J269 797 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 TTC26A0AVF1 554 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 MYMKA6NI61 221 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 PODXLO00592 558 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 OGTO15294 1046 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 CXCL8P10145 99 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 GAP43P17677 238 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 NMT1P30419 496 aaKnown RBP16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 STAT6P42226 847 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 ZXDAP98168 799 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 PTPN21Q16825 1174 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 SEZ6Q53EL9 994 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 DYMQ7RTS9 669 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 SFR1Q86XK3 245 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 GLYCTKQ8IVS8 523 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 PLCD3Q8N3E9 789 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 TDRD5Q8NAT2 981 aaKnown RBP16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 KREMEN2Q8NCW0 462 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 DNAJC19Q96DA6 116 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 MTRRQ9UBK8 725 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 FBXW11Q9UKB1 542 aa16.22■□□□□ 0.19
SMIM11A-203ENST00000399299 A0A087X0B3 334 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 CCDC195A0A1B0GUA6 201 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 SYN3O14994 580 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 RFPL2O75678 378 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 PPP1R37O75864 691 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 F13A1P00488 732 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 ADRB2P07550 413 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 SP100P23497 879 aaPredicted RBP16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 IGFBP6P24592 240 aaPredicted RBP16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 PPP2R3AQ06190 1150 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 ATL3Q6DD88 541 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 SLC39A4Q6P5W5 647 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 ANKS3Q6ZW76 656 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 OTOP3Q7RTS5 596 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 ZNF720Q7Z2F6 126 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 FEZF2Q8TBJ5 459 aa16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 C18orf25Q96B23 403 aaPredicted RBP16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 ZNF707Q96C28 371 aaPredicted RBP16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 ACSF2Q96CM8 615 aaPredicted RBP16.21■□□□□ 0.19
SMIM11A-203ENST00000399299 MSTO1Q9BUK6 570 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms