RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 RLFQ13129 1914 aa12.17□□□□□ -0.46
C4orf3-201ENST00000399075 FAM170AA1A519 330 aa12.17□□□□□ -0.46
C4orf3-201ENST00000399075 HNRNPDLO14979 420 aaKnown RBP12.17□□□□□ -0.46
C4orf3-201ENST00000399075 DPEP1P16444 411 aa12.17□□□□□ -0.46
C4orf3-201ENST00000399075 PTP4A2Q12974 167 aa12.17□□□□□ -0.46
C4orf3-201ENST00000399075 BAATQ14032 418 aaPredicted RBP12.17□□□□□ -0.46
C4orf3-201ENST00000399075 SLC29A2Q14542 456 aa12.17□□□□□ -0.46
C4orf3-201ENST00000399075 ZNF568Q3ZCX4 644 aa12.17□□□□□ -0.46
C4orf3-201ENST00000399075 TRMT10CQ7L0Y3 403 aaKnown RBP12.17□□□□□ -0.46
C4orf3-201ENST00000399075 REPS2Q8NFH8 660 aa12.17□□□□□ -0.46
C4orf3-201ENST00000399075 BTBD6Q96KE9 485 aa12.17□□□□□ -0.46
C4orf3-201ENST00000399075 C1orf112Q9NSG2 853 aa12.17□□□□□ -0.46
C4orf3-201ENST00000399075 PCDHB2Q9Y5E7 798 aa12.17□□□□□ -0.46
C4orf3-201ENST00000399075 RIPK2O43353 540 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 EXTL3O43909 919 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 STAM2O75886 525 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 SSR1P43307 286 aaKnown RBP12.16□□□□□ -0.46
C4orf3-201ENST00000399075 PSMD6Q15008 389 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 KCTD19Q17RG1 926 aaPredicted RBP12.16□□□□□ -0.46
C4orf3-201ENST00000399075 TBC1D10BQ4KMP7 808 aaPredicted RBP12.16□□□□□ -0.46
C4orf3-201ENST00000399075 MFSD5Q6N075 450 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 MMS22LQ6ZRQ5 1243 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 CCDC91Q7Z6B0 441 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 SUGP1Q8IWZ8 645 aaKnown RBP12.16□□□□□ -0.46
C4orf3-201ENST00000399075 MCOLN2Q8IZK6 566 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 KAT2BQ92831 832 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 IFT74Q96LB3 600 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 CAMKK2Q96RR4 588 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 ROPN1BQ9BZX4 212 aaPredicted RBP12.16□□□□□ -0.46
C4orf3-201ENST00000399075 SEMA4AQ9H3S1 761 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 ROPN1Q9HAT0 212 aaPredicted RBP12.16□□□□□ -0.46
C4orf3-201ENST00000399075 ATP6V0A4Q9HBG4 840 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 XPNPEP1Q9NQW7 623 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 SIP14410 1827 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 KIAA1217Q5T5P2 1943 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 PHIPQ8WWQ0 1821 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 RGS16O15492 202 aaPredicted RBP12.16□□□□□ -0.46
C4orf3-201ENST00000399075 DGKZQ13574 1117 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 CPNE8Q86YQ8 564 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 NSUN6Q8TEA1 469 aaKnown RBP12.16□□□□□ -0.46
C4orf3-201ENST00000399075 ATG4CQ96DT6 458 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 CCDC134Q9H6E4 229 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 ACTR5Q9H9F9 607 aaPredicted RBP12.16□□□□□ -0.46
C4orf3-201ENST00000399075 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.16□□□□□ -0.46
C4orf3-201ENST00000399075 STYXL1Q9Y6J8 313 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 MYPNQ86TC9 1320 aa12.16□□□□□ -0.46
C4orf3-201ENST00000399075 TTC36A6NLP5 189 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 DLATP10515 647 aaKnown RBP12.15□□□□□ -0.46
C4orf3-201ENST00000399075 KRT5P13647 590 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 DRD4P21917 467 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 RPS12P25398 132 aaKnown RBP12.15□□□□□ -0.46
C4orf3-201ENST00000399075 MAPK4P31152 587 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 CENPCQ03188 943 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 ACTN3Q08043 901 aaPredicted RBP12.15□□□□□ -0.46
C4orf3-201ENST00000399075 IFT88Q13099 833 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 CALCOCO2Q13137 446 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 TAS1R3Q7RTX0 852 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 CACNA2D3Q8IZS8 1091 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 CHMP6Q96FZ7 201 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 SEC16BQ96JE7 1060 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 ADAM7Q9H2U9 754 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 JPH1Q9HDC5 661 aaPredicted RBP12.15□□□□□ -0.46
C4orf3-201ENST00000399075 CYP26B1Q9NR63 512 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 ANAPC7Q9UJX3 599 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 ADAMTS5Q9UNA0 930 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 COL11A1P12107 1806 aaPredicted RBP12.15□□□□□ -0.46
C4orf3-201ENST00000399075 CYP1A1P04798 512 aaPredicted RBP12.15□□□□□ -0.46
C4orf3-201ENST00000399075 MAP2K2P36507 400 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 BACE1P56817 501 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 ZACNQ401N2 412 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 SGO2Q562F6 1265 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 GKAP1Q5VSY0 366 aaPredicted RBP12.15□□□□□ -0.46
C4orf3-201ENST00000399075 PPP1R2P3Q6NXS1 205 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 TRIM72Q6ZMU5 477 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 C12orf42Q96LP6 360 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 RIPK3Q9Y572 518 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 CAPN7Q9Y6W3 813 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 LOC285556D6RIA3 1793 aa12.15□□□□□ -0.46
C4orf3-201ENST00000399075 ATP2A1O14983 1001 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 CLDN3O15551 220 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 RGS20O76081 388 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 ITIH2P19823 946 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 PRKCEQ02156 737 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 CAV1Q03135 178 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 PTK6Q13882 451 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 QPCTQ16769 361 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 WDR44Q5JSH3 913 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 RHBDF2Q6PJF5 856 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 ABHD15Q6UXT9 468 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 CCDC121Q6ZUS5 278 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 GRK7Q8WTQ7 553 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 ATXN2LQ8WWM7 1075 aaKnown RBP12.15□□□□□ -0.47
C4orf3-201ENST00000399075 FAM213AQ9BRX8 229 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 AZI2Q9H6S1 392 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 SLC9A2Q9UBY0 812 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.15□□□□□ -0.47
C4orf3-201ENST00000399075 MROH7Q68CQ1 1323 aa12.15□□□□□ -0.47
C4orf3-201ENST00000399075 KIF1CO43896 1103 aaKnown RBP12.14□□□□□ -0.47
C4orf3-201ENST00000399075 PIGRP01833 764 aa12.14□□□□□ -0.47
C4orf3-201ENST00000399075 PPP1R7Q15435 360 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms