RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 GSDMAQ96QA5 445 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 ZNF70Q9UC06 446 aaPredicted RBP9.85□□□□□ -0.83
ATL3-201ENST00000398868 STXBP3O00186 592 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 HSPA8P11142 646 aaKnown RBP9.85□□□□□ -0.83
ATL3-201ENST00000398868 ST8SIA6P61647 398 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 PPP2R2AP63151 447 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 GPS1Q13098 491 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 PRR5LQ6MZQ0 368 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 RIN2Q8WYP3 895 aaPredicted RBP9.85□□□□□ -0.83
ATL3-201ENST00000398868 MS4A14Q96JA4 679 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.85□□□□□ -0.83
ATL3-201ENST00000398868 KRT4P19013 534 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 FASTKD1Q53R41 847 aaKnown RBP9.85□□□□□ -0.83
ATL3-201ENST00000398868 NAIF1Q69YI7 327 aaPredicted RBP9.85□□□□□ -0.83
ATL3-201ENST00000398868 CDC42EP5Q6NZY7 148 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 FOXR1Q6PIV2 292 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 TTLL13PA6NNM8 815 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 HAUS5O94927 633 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 IRX1P78414 480 aaPredicted RBP9.85□□□□□ -0.83
ATL3-201ENST00000398868 KCNH2Q12809 1159 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 SYTL3Q4VX76 610 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 SERPING1P05155 500 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 SLFN12LQ6IEE8 588 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 ANO5Q75V66 913 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 PID1Q7Z2X4 250 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 FBXO16Q8IX29 292 aaPredicted RBP9.85□□□□□ -0.83
ATL3-201ENST00000398868 PAWRQ96IZ0 340 aaKnown RBP9.85□□□□□ -0.83
ATL3-201ENST00000398868 PBKQ96KB5 322 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 ALDH1A1P00352 501 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 CDH6P55285 790 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 SIRT2Q8IXJ6 389 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 CLMNQ96JQ2 1002 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 SENP7Q9BQF6 1050 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 SHCBP1LQ9BZQ2 653 aa9.85□□□□□ -0.83
ATL3-201ENST00000398868 IQANK1A0A1B0GTG1 560 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 FTLP02792 175 aaPredicted RBP9.84□□□□□ -0.83
ATL3-201ENST00000398868 ANGPT1Q15389 498 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 DEPDC1Q5TB30 811 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 UTS2BQ765I0 119 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 VSTM4Q8IW00 320 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 LINC00301Q8NCQ3 95 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 BRD8Q9H0E9 1235 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 NEUROG2Q9H2A3 272 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 UNC45AQ9H3U1 944 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 GOLPH3LQ9H4A5 285 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 MAP3K13O43283 966 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 CHRNA3P32297 505 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 LLGL2Q6P1M3 1020 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 SH3TC2Q8TF17 1288 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 GIPC2Q8TF65 315 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 CYFIP2Q96F07 1278 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 DHTKD1Q96HY7 919 aaPredicted RBP9.84□□□□□ -0.83
ATL3-201ENST00000398868 PNKPQ96T60 521 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 NPHS2Q9NP85 383 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 DLGAP2Q9P1A6 1054 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 KDM5CP41229 1560 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 LRRC53A6NM62 1247 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 RALAP11233 206 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 POM121L1PQ3SYA9 428 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 WDR75Q8IWA0 830 aaKnown RBP9.84□□□□□ -0.83
ATL3-201ENST00000398868 RAD54LQ92698 747 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 CHD1O14646 1710 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 KCNN4O15554 427 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 PPP6R2O75170 966 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 APOA1P02647 267 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 GCFC2P16383 781 aaKnown RBP9.84□□□□□ -0.83
ATL3-201ENST00000398868 PAMP19021 973 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 DMC1Q14565 340 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 DRAP1Q14919 205 aaPredicted RBP9.84□□□□□ -0.83
ATL3-201ENST00000398868 C10orf120Q5SQS8 335 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 BTBD6Q96KE9 485 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 LY9Q9HBG7 655 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 USP20Q9Y2K6 914 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 PHF20L1A8MW92 1017 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 PMS2P54278 862 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 TRIM25Q14258 630 aaKnown RBP9.84□□□□□ -0.83
ATL3-201ENST00000398868 COG2Q14746 738 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 EFTUD2Q15029 972 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATL3-201ENST00000398868 NUP93Q8N1F7 819 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 APPL2Q8NEU8 664 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 SLC7A14Q8TBB6 771 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 DCUN1D1Q96GG9 259 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 AK8Q96MA6 479 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 OLFM3Q96PB7 478 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 SRPRBQ9Y5M8 271 aaKnown RBP9.84□□□□□ -0.83
ATL3-201ENST00000398868 PLEKHG1Q9ULL1 1385 aa9.84□□□□□ -0.83
ATL3-201ENST00000398868 ARHGAP10A1A4S6 786 aa9.83□□□□□ -0.84
ATL3-201ENST00000398868 SUPT3HB4E1H0 165 aa9.83□□□□□ -0.84
ATL3-201ENST00000398868 CCDC142Q17RM4 750 aa9.83□□□□□ -0.84
ATL3-201ENST00000398868 NBPF9Q3BBW0 867 aa9.83□□□□□ -0.84
ATL3-201ENST00000398868 ALKBH5Q6P6C2 394 aaKnown RBP9.83□□□□□ -0.84
ATL3-201ENST00000398868 CENPUQ71F23 418 aa9.83□□□□□ -0.84
ATL3-201ENST00000398868 PLD3Q8IV08 490 aa9.83□□□□□ -0.84
ATL3-201ENST00000398868 MB21D1Q8N884 522 aa9.83□□□□□ -0.84
ATL3-201ENST00000398868 STK17AQ9UEE5 414 aa9.83□□□□□ -0.84
ATL3-201ENST00000398868 SLC25A13Q9UJS0 675 aa9.83□□□□□ -0.84
ATL3-201ENST00000398868 TIMM13Q9Y5L4 95 aaPredicted RBP9.83□□□□□ -0.84
ATL3-201ENST00000398868 MAGI2Q86UL8 1455 aa9.83□□□□□ -0.84
ATL3-201ENST00000398868 ORC4O43929 436 aa9.83□□□□□ -0.84
ATL3-201ENST00000398868 CYBBP04839 570 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms