RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 NOMO2Q5JPE7 1267 aa25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 TCERG1LQ5VWI1 586 aa25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 JADE1Q6IE81 842 aa25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 PHOSPHO2Q8TCD6 241 aa25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 ZMAT2Q96NC0 199 aaKnown RBP25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 CASD1Q96PB1 797 aa25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 POP1Q99575 1024 aaKnown RBP25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 CGRRF1Q99675 332 aa25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 RBSNQ9H1K0 784 aa25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 FNDC1Q4ZHG4 1894 aaPredicted RBP25.58■■□□□ 1.69
TSPAN4-203ENST00000397397 SMIM28A0A1B0GU29 152 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 LRRIQ3A6PVS8 624 aaPredicted RBP25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 TBKBP1A7MCY6 615 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 INPPL1O15357 1258 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 DGKIO75912 1065 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 POMCP01189 267 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 NFICP08651 508 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 TRIM49P0CI25 452 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 TRIM49CP0CI26 452 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 ATP2A2P16615 1042 aaKnown RBP25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 ZNF18P17022 549 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 TNNI1P19237 187 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 EEF1GP26641 437 aaKnown RBP25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 ENPEPQ07075 957 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 TMEM132DQ14C87 1099 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 LMBRD2Q68DH5 695 aaPredicted RBP25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 TRIM59Q8IWR1 403 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 EFCAB13Q8IY85 973 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 GSTCDQ8NEC7 633 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 ZBED2Q9BTP6 218 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 DERAQ9Y315 318 aa25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 TDRD15B5MCY1 1934 aaKnown RBP25.57■■□□□ 1.68
TSPAN4-203ENST00000397397 TFAMQ00059 246 aaKnown RBP25.56■■□□□ 1.68
TSPAN4-203ENST00000397397 PAN2Q504Q3 1202 aaKnown RBP25.56■■□□□ 1.68
TSPAN4-203ENST00000397397 WDR49Q8IV35 697 aa25.56■■□□□ 1.68
TSPAN4-203ENST00000397397 HERC6Q8IVU3 1022 aa25.56■■□□□ 1.68
TSPAN4-203ENST00000397397 TSPAN18Q96SJ8 248 aa25.56■■□□□ 1.68
TSPAN4-203ENST00000397397 PLAGL2Q9UPG8 496 aa25.56■■□□□ 1.68
TSPAN4-203ENST00000397397 C2CD2Q9Y426 696 aa25.56■■□□□ 1.68
TSPAN4-203ENST00000397397 GJB5O95377 273 aa25.55■■□□□ 1.68
TSPAN4-203ENST00000397397 THP07101 528 aa25.55■■□□□ 1.68
TSPAN4-203ENST00000397397 C1orf220Q5T0J3 134 aa25.55■■□□□ 1.68
TSPAN4-203ENST00000397397 NT5DC4Q86YG4 428 aa25.55■■□□□ 1.68
TSPAN4-203ENST00000397397 ANKRD20A12PQ8NF67 263 aa25.55■■□□□ 1.68
TSPAN4-203ENST00000397397 PPP1R10Q96QC0 940 aaKnown RBP25.55■■□□□ 1.68
TSPAN4-203ENST00000397397 KANSL3Q9P2N6 904 aa25.55■■□□□ 1.68
TSPAN4-203ENST00000397397 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.55■■□□□ 1.68
TSPAN4-203ENST00000397397 PTPRJQ12913 1337 aa25.55■■□□□ 1.68
TSPAN4-203ENST00000397397 ATP1A3P13637 1013 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 MCCD1P59942 119 aaPredicted RBP25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 GRIK3Q13003 919 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 CACTINQ8WUQ7 758 aaKnown RBP25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 RSPH1Q8WYR4 309 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 SLC35C1Q96A29 364 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 ZNF689Q96CS4 500 aaPredicted RBP25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 ANKRD36BP1Q96IX9 119 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 FAM84AQ96KN4 292 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 YME1L1Q96TA2 773 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 TUBGCP2Q9BSJ2 902 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 MRPL9Q9BYD2 267 aaKnown RBP25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 MMRN2Q9H8L6 949 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 TBC1D13Q9NVG8 400 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 INTS13Q9NVM9 706 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 UBQLN1Q9UMX0 589 aaKnown RBP25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 XPOTO43592 962 aaKnown RBP25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 STX10O60499 249 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 TMEM191BP0C7N4 346 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 PRKCSHP14314 528 aaPredicted RBP25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 CLDN10P78369 228 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 RNASELQ05823 741 aaKnown RBP25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 KRT31Q15323 416 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 DUOXA2Q1HG44 320 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 BEST2Q8NFU1 509 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 OR5B17Q8NGF7 314 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 ZNF516Q92618 1163 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 C18orf25Q96B23 403 aaPredicted RBP25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 LRCH3Q96II8 777 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 SLC38A7Q9NVC3 462 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 TAB2Q9NYJ8 693 aa25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 LIMA1Q9UHB6 759 aaKnown RBP25.54■■□□□ 1.68
TSPAN4-203ENST00000397397 TNNC2P02585 160 aa25.53■■□□□ 1.68
TSPAN4-203ENST00000397397 ZBTB6Q15916 424 aa25.53■■□□□ 1.68
TSPAN4-203ENST00000397397 MAN2A1Q16706 1144 aa25.53■■□□□ 1.68
TSPAN4-203ENST00000397397 FAM193BQ96PV7 902 aaPredicted RBP25.53■■□□□ 1.68
TSPAN4-203ENST00000397397 MTMR12Q9C0I1 747 aa25.53■■□□□ 1.68
TSPAN4-203ENST00000397397 RC3H2Q9HBD1 1191 aaKnown RBP25.53■■□□□ 1.68
TSPAN4-203ENST00000397397 TUBGCP4Q9UGJ1 667 aa25.53■■□□□ 1.68
TSPAN4-203ENST00000397397 COL4A6Q14031 1691 aa25.53■■□□□ 1.68
TSPAN4-203ENST00000397397 GCLMP48507 274 aa25.52■■□□□ 1.68
TSPAN4-203ENST00000397397 GUCY2FP51841 1108 aa25.52■■□□□ 1.68
TSPAN4-203ENST00000397397 AP3M2P53677 418 aa25.52■■□□□ 1.68
TSPAN4-203ENST00000397397 HTRA4P83105 476 aaPredicted RBP25.52■■□□□ 1.68
TSPAN4-203ENST00000397397 PPP3CAQ08209 521 aa25.52■■□□□ 1.68
TSPAN4-203ENST00000397397 KCNH2Q12809 1159 aa25.52■■□□□ 1.68
TSPAN4-203ENST00000397397 CMTR2Q8IYT2 770 aaKnown RBP25.52■■□□□ 1.68
TSPAN4-203ENST00000397397 LRRC43Q8N309 656 aa25.52■■□□□ 1.68
TSPAN4-203ENST00000397397 RAD9AQ99638 391 aa25.52■■□□□ 1.68
TSPAN4-203ENST00000397397 INSL6Q9Y581 213 aa25.52■■□□□ 1.68
TSPAN4-203ENST00000397397 TLL1O43897 1013 aa25.51■■□□□ 1.67
TSPAN4-203ENST00000397397 AFPP02771 609 aaKnown RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms