RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 MAPK13O15264 365 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 UFL1O94874 794 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 TPBGLP0DKB5 382 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 CA4P22748 312 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 CHRNA5P30532 468 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 WDR4P57081 412 aaKnown RBP10.48□□□□□ -0.73
TRIM39-203ENST00000396547 RCN2Q14257 317 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 MTFR1Q15390 333 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 GPR162Q16538 588 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 TSNAXIP1Q2TAA8 658 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 TAF1BQ53T94 588 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-203ENST00000396547 ZNF365Q70YC5 407 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 ZNF804AQ7Z570 1209 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 SLC47A2Q86VL8 602 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 ZC3H18Q86VM9 953 aaKnown RBP10.48□□□□□ -0.73
TRIM39-203ENST00000396547 ZSWIM2Q8NEG5 633 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 OLIG1Q8TAK6 271 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 DYDC2Q96IM9 177 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 MAGEB18Q96M61 343 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 P2RX7Q99572 595 aaKnown RBP10.48□□□□□ -0.73
TRIM39-203ENST00000396547 DDX50Q9BQ39 737 aaKnown RBP10.48□□□□□ -0.73
TRIM39-203ENST00000396547 CCDC77Q9BR77 488 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 DENND2DQ9H6A0 471 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-203ENST00000396547 UBN1Q9NPG3 1134 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 PCDHA3Q9Y5H8 950 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 A0A1B0GVG6 124 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 A6NHS1 94 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 GOLGA8RI6L899 631 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 YY1P25490 414 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 RPA1P27694 616 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 ALDH3A1P30838 453 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 SCNN1DP51172 638 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 KLC1Q07866 573 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 TCP10Q12799 353 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 SEPT7Q16181 437 aaKnown RBP10.48□□□□□ -0.73
TRIM39-203ENST00000396547 EAPPQ56P03 285 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-203ENST00000396547 HYIQ5T013 277 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 HHATQ5VTY9 493 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 KAZNQ674X7 775 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 MFSD5Q6N075 450 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 FOXR2Q6PJQ5 311 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 SLFN12Q8IYM2 578 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 LRRC8CQ8TDW0 803 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 KLF6Q99612 283 aaPredicted RBP10.48□□□□□ -0.73
TRIM39-203ENST00000396547 VPS37BQ9H9H4 285 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 KLHL11Q9NVR0 708 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 CYP39A1Q9NYL5 469 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 PRKAG3Q9UGI9 489 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 ZBTB21Q9ULJ3 1066 aa10.48□□□□□ -0.73
TRIM39-203ENST00000396547 EXOC1LA0A1B0GW35 172 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 CFAP69A5D8W1 941 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 C6orf229H3BNL8 230 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 O00370 1275 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 EEF2P13639 858 aaKnown RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 PECAM1P16284 738 aaPredicted RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 HSPA6P17066 643 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 PPP4CP60510 307 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 GRAPQ13588 217 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 C11orf91Q3C1V1 193 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 MTDHQ86UE4 582 aaKnown RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 ZC3H3Q8IXZ2 948 aaKnown RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 SCYL3Q8IZE3 742 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 GRAPLQ8TC17 118 aaPredicted RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 SAYSD1Q9NPB0 183 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 ETAA1Q9NY74 926 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 R3HDM2Q9Y2K5 976 aaKnown RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 A0A0G2JND7 137 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 GOLGA8SH3BPF8 625 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 GOLGA8MH3BSY2 632 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 NFKBIEO00221 500 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 SLC16A3O15427 465 aaKnown RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 POLGP54098 1239 aaPredicted RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 CACNB3P54284 484 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 GTF2IP78347 998 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 ZBTB16Q05516 673 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 KHDC1Q4VXA5 237 aaKnown RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 PPP1R15BQ5SWA1 713 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 NOP9Q86U38 636 aaKnown RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 SNF8Q96H20 258 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 AGPAT3Q9NRZ7 376 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 ANAPC7Q9UJX3 599 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 FAM47DPA6NHR8 397 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 MSH4O15457 936 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 UBTFL6P0CB48 400 aaPredicted RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 KRT5P13647 590 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 ANXA13P27216 316 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 CLK2P49760 499 aaKnown RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 PKN2Q16513 984 aaKnown RBP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 FAM182AQ5T1J6 154 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 CYFIP1Q7L576 1253 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 ANKRD35Q8N283 1001 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 HERPUD2Q9BSE4 406 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 TMEM109Q9BVC6 243 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 TRIM4Q9C037 500 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 WNT8AQ9H1J5 351 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 PARVGQ9HBI0 331 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.47□□□□□ -0.73
TRIM39-203ENST00000396547 ZFP69BQ9UJL9 534 aa10.47□□□□□ -0.73
TRIM39-203ENST00000396547 hCG_1984214I3L0E3 225 aa10.46□□□□□ -0.73
TRIM39-203ENST00000396547 ZCCHC18P0CG32 403 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms