RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 TMEM161AQ9NX61 479 aa9.55□□□□□ -0.88
CCR9-203ENST00000395963 PRKAG2Q9UGJ0 569 aa9.55□□□□□ -0.88
CCR9-203ENST00000395963 PCDHB2Q9Y5E7 798 aa9.55□□□□□ -0.88
CCR9-203ENST00000395963 PDCD11Q14690 1871 aaKnown RBP9.55□□□□□ -0.88
CCR9-203ENST00000395963 ARHGEF37A1IGU5 675 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 TISP43B9A030 160 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 C9IYK1 514 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 NRDCO43847 1150 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 ITGA4P13612 1032 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 PNPLA4P41247 253 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 NFX1Q12986 1120 aaKnown RBP9.54□□□□□ -0.88
CCR9-203ENST00000395963 EPC2Q52LR7 807 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 TCERG1LQ5VWI1 586 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 ZBTB33Q86T24 672 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 CNGA4Q8IV77 575 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 LRRC52Q8N7C0 313 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 BEST2Q8NFU1 509 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 IMPG2Q9BZV3 1241 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 DNAI2Q9GZS0 605 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 SIK3Q9Y2K2 1263 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 TTLL13PA6NNM8 815 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 C4BPAP04003 597 aaKnown RBP9.54□□□□□ -0.88
CCR9-203ENST00000395963 TMEM191BP0C7N4 346 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 ACOT2P49753 483 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 MBTPS1Q14703 1052 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 TMEM132DQ14C87 1099 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 ZNF598Q86UK7 904 aaKnown RBP9.54□□□□□ -0.88
CCR9-203ENST00000395963 ECHDC2Q86YB7 292 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 THNSL1Q8IYQ7 743 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 ZNF397Q8NF99 534 aaPredicted RBP9.54□□□□□ -0.88
CCR9-203ENST00000395963 SYN2Q92777 582 aaPredicted RBP9.54□□□□□ -0.88
CCR9-203ENST00000395963 PPP1R16BQ96T49 567 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 MRPL9Q9BYD2 267 aaKnown RBP9.54□□□□□ -0.88
CCR9-203ENST00000395963 TMX1Q9H3N1 280 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 CEP72Q9P209 647 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 ANK1P16157 1881 aa9.54□□□□□ -0.88
CCR9-203ENST00000395963 TULP2O00295 520 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 NBNO60934 754 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 MYCP01106 439 aaPredicted RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 CCDC172P0C7W6 258 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 ATF7P17544 494 aaPredicted RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 TNNI1P19237 187 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 TBXAS1P24557 533 aaPredicted RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 ANXA13P27216 316 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 LRPAP1P30533 357 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 ATN1P54259 1190 aaPredicted RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 YWHAEP62258 255 aaKnown RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 GCNT1Q02742 428 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 GRIK3Q13003 919 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 TBX2Q13207 712 aaPredicted RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 ZBTB6Q15916 424 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 SLC10A6Q3KNW5 377 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 C1orf220Q5T0J3 134 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 NPAS4Q8IUM7 802 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 DRC7Q8IY82 874 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 SMG8Q8ND04 991 aaKnown RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 EHBP1Q8NDI1 1231 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 NEK11Q8NG66 645 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 ZNF560Q96MR9 790 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 ADAM2Q99965 735 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 TMEM117Q9H0C3 514 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 WNT8AQ9H1J5 351 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 GOLGA8IPA6NC78 632 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 GOLGA8JA6NMD2 632 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 RECQL4O94761 1208 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 P4HA1P13674 534 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 RAG1P15918 1043 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 RPL9P32969 192 aaKnown RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 PLCB2Q00722 1185 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 IKBKEQ14164 716 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 SGSM1Q2NKQ1 1148 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 UMODL1Q5DID0 1318 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 PSRC1Q6PGN9 363 aaPredicted RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 SV2AQ7L0J3 742 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 PPFIBP1Q86W92 1011 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 CCDC112Q8NEF3 446 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 DDX27Q96GQ7 796 aaKnown RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 ZNF668Q96K58 619 aaPredicted RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 RPS6KC1Q96S38 1066 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 NAA15Q9BXJ9 866 aaKnown RBP9.53□□□□□ -0.88
CCR9-203ENST00000395963 IKZF4Q9H2S9 585 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 RSAD1Q9HA92 442 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 RAB20Q9NX57 234 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 GCNT4Q9P109 453 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 STK39Q9UEW8 545 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 CAPN11Q9UMQ6 739 aa9.53□□□□□ -0.88
CCR9-203ENST00000395963 AP5Z1O43299 807 aa9.52□□□□□ -0.88
CCR9-203ENST00000395963 CXCL8P10145 99 aa9.52□□□□□ -0.88
CCR9-203ENST00000395963 RBP5P82980 135 aa9.52□□□□□ -0.88
CCR9-203ENST00000395963 WDR44Q5JSH3 913 aa9.52□□□□□ -0.88
CCR9-203ENST00000395963 RDH13Q8NBN7 331 aa9.52□□□□□ -0.88
CCR9-203ENST00000395963 URGCPQ8TCY9 931 aa9.52□□□□□ -0.88
CCR9-203ENST00000395963 PLEKHO2Q8TD55 490 aa9.52□□□□□ -0.88
CCR9-203ENST00000395963 EIF2AQ9BY44 585 aaKnown RBP9.52□□□□□ -0.88
CCR9-203ENST00000395963 TTYH3Q9C0H2 523 aa9.52□□□□□ -0.88
CCR9-203ENST00000395963 MTIF3Q9H2K0 278 aaKnown RBP9.52□□□□□ -0.88
CCR9-203ENST00000395963 IL23AQ9NPF7 189 aa9.52□□□□□ -0.88
CCR9-203ENST00000395963 SNTG2Q9NY99 539 aa9.52□□□□□ -0.88
CCR9-203ENST00000395963 APEX2Q9UBZ4 518 aa9.52□□□□□ -0.88
CCR9-203ENST00000395963 CITO14578 2027 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms