RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 NEXMIFQ5QGS0 1516 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 SLC25A27O95847 323 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 RFC5P40937 340 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ACTR2P61160 394 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 RBBP7Q16576 425 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 RAET1EQ8TD07 263 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 MAN1A2O60476 641 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 POLE2P56282 527 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 EDRF1Q3B7T1 1238 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 CC2D1AQ6P1N0 951 aaPredicted RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 SNX12Q9UMY4 172 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 PITPNM2Q9BZ72 1349 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 A0A1W2PQJ5 194 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 TXNP10599 105 aaKnown RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 RALBP11234 206 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 GFAPP14136 432 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 CCDC15Q0P6D6 951 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 WASHC5Q12768 1159 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 PDAP1Q13442 181 aaKnown RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ZBTB41Q5SVQ8 909 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 IZUMO3Q5VZ72 239 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 SRBD1Q8N5C6 995 aaKnown RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 MTIF3Q9H2K0 278 aaKnown RBP5.75□□□□□ -1.49
VPS13C-204ENST00000395898 OLFML3Q9NRN5 406 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ERAP1Q9NZ08 941 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 DCTN4Q9UJW0 460 aa5.75□□□□□ -1.49
VPS13C-204ENST00000395898 ZBBXA8MT70 800 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 EXOSC10Q01780 885 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 MTMR2Q13614 643 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 SLC35G2Q8TBE7 412 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 OXER1Q8TDS5 423 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 IGDCC4Q8TDY8 1250 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PHF20Q9BVI0 1012 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 CHGBP05060 677 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 SERPINB10P48595 397 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 FMO5P49326 533 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 GRIN1Q05586 938 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PDCLQ13371 301 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 TMEM132DQ14C87 1099 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 KRT72Q14CN4 511 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 SNRNP35Q16560 246 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 SV2CQ496J9 727 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 MEI1Q5TIA1 1274 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 RNF135Q8IUD6 432 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 USP13Q92995 863 aaPredicted RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 SH3KBP1Q96B97 665 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 CATSPERBQ9H7T0 1116 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 WARS2Q9UGM6 360 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 FRMD3A2A2Y4 597 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 SUPT3HO75486 399 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 HAUS5O94927 633 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PDHBP11177 359 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 MMP14P50281 582 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 NPEPPSP55786 919 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 ST8SIA6P61647 398 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 TMED1Q13445 227 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 HHIPL2Q6UWX4 724 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 ELOA2Q8IYF1 753 aaPredicted RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 CMTM5Q96DZ9 223 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 OLFM3Q96PB7 478 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 HSPBP1Q9NZL4 362 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PCDHB2Q9Y5E7 798 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 P4HA2O15460 535 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PHF2O75151 1096 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 CASP1P29466 404 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 CPT1AP50416 773 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 SNAPC2Q13487 334 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 SF3B3Q15393 1217 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 CNGA3Q16281 694 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 LCA5Q86VQ0 697 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 DDIASQ8IXT1 998 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 STX19Q8N4C7 294 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 TNIP2Q8NFZ5 429 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 GFM2Q969S9 779 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 TMEM8AQ9HCN3 771 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 USP31Q70CQ4 1352 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 AFF2P51816 1311 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PRR29P0C7W0 189 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 LCP1P13796 627 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PCSK1P29120 753 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 ZNF543Q08ER8 600 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 GRAMD4Q6IC98 578 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 C16orf87Q6PH81 154 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 RGS9BPQ6ZS82 235 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 YAF2Q8IY57 180 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 TMCO5AQ8N6Q1 288 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 CALML6Q8TD86 181 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 RNF181Q9P0P0 153 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 AMACRQ9UHK6 382 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 FBXO2Q9UK22 296 aaPredicted RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PPRC1Q5VV67 1664 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 ENTPD3O75355 529 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PRKCBP05771 671 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 HIST1H2AGP0C0S8 130 aaPredicted RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 SRGNP10124 158 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 HIST1H2ADP20671 130 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 SERPINB9P50453 376 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 NCOA4Q13772 614 aa5.74□□□□□ -1.49
VPS13C-204ENST00000395898 LBRQ14739 615 aaKnown RBP5.74□□□□□ -1.49
VPS13C-204ENST00000395898 PCYOX1LQ8NBM8 494 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms