RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 MPZL3Q6UWV2 235 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 TMEM161BQ8NDZ6 487 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 SPIRE2Q8WWL2 714 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 DDX27Q96GQ7 796 aaKnown RBP19.77■□□□□ 0.76
CXCL12-204ENST00000395793 TIPINQ9BVW5 301 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 UPF2Q9HAU5 1272 aaKnown RBP19.77■□□□□ 0.76
CXCL12-204ENST00000395793 PIDD1Q9HB75 910 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 EPS15L1Q9UBC2 864 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 DUSP12Q9UNI6 340 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 RBM19Q9Y4C8 960 aaKnown RBP19.77■□□□□ 0.76
CXCL12-204ENST00000395793 MAPTP10636 758 aaKnown RBP19.76■□□□□ 0.75
CXCL12-204ENST00000395793 HARSP12081 509 aaKnown RBP19.76■□□□□ 0.75
CXCL12-204ENST00000395793 SEZ6Q53EL9 994 aa19.76■□□□□ 0.75
CXCL12-204ENST00000395793 LARP1BQ659C4 914 aaKnown RBP19.76■□□□□ 0.75
CXCL12-204ENST00000395793 CWF19L1Q69YN2 538 aaKnown RBP19.76■□□□□ 0.75
CXCL12-204ENST00000395793 GET4Q7L5D6 327 aaPredicted RBP19.76■□□□□ 0.75
CXCL12-204ENST00000395793 APBB1IPQ7Z5R6 666 aaPredicted RBP19.76■□□□□ 0.75
CXCL12-204ENST00000395793 TMEM130Q8N3G9 435 aa19.76■□□□□ 0.75
CXCL12-204ENST00000395793 STAMQ92783 540 aa19.76■□□□□ 0.75
CXCL12-204ENST00000395793 UROC1Q96N76 676 aa19.76■□□□□ 0.75
CXCL12-204ENST00000395793 HAPLN2Q9GZV7 340 aa19.76■□□□□ 0.75
CXCL12-204ENST00000395793 FAM86C1Q9NVL1 165 aa19.76■□□□□ 0.75
CXCL12-204ENST00000395793 IGSF9Q9P2J2 1179 aa19.76■□□□□ 0.75
CXCL12-204ENST00000395793 MTRRQ9UBK8 725 aa19.76■□□□□ 0.75
CXCL12-204ENST00000395793 MYH15Q9Y2K3 1946 aa19.76■□□□□ 0.75
CXCL12-204ENST00000395793 C8AP07357 584 aa19.75■□□□□ 0.75
CXCL12-204ENST00000395793 YARSP54577 528 aaKnown RBP19.75■□□□□ 0.75
CXCL12-204ENST00000395793 NTHL1P78549 312 aa19.75■□□□□ 0.75
CXCL12-204ENST00000395793 RAB33AQ14088 237 aa19.75■□□□□ 0.75
CXCL12-204ENST00000395793 ST13P5Q8NFI4 369 aaPredicted RBP19.75■□□□□ 0.75
CXCL12-204ENST00000395793 C18orf25Q96B23 403 aaPredicted RBP19.75■□□□□ 0.75
CXCL12-204ENST00000395793 CDK5RAP3Q96JB5 506 aa19.75■□□□□ 0.75
CXCL12-204ENST00000395793 PRRX2Q99811 253 aa19.75■□□□□ 0.75
CXCL12-204ENST00000395793 TOPORSQ9NS56 1045 aaPredicted RBP19.75■□□□□ 0.75
CXCL12-204ENST00000395793 BLOC1S4Q9NUP1 217 aa19.75■□□□□ 0.75
CXCL12-204ENST00000395793 CNTN3Q9P232 1028 aa19.75■□□□□ 0.75
CXCL12-204ENST00000395793 DAXXQ9UER7 740 aaPredicted RBP19.75■□□□□ 0.75
CXCL12-204ENST00000395793 KCNE1P15382 129 aa19.74■□□□□ 0.75
CXCL12-204ENST00000395793 NPR3P17342 541 aa19.74■□□□□ 0.75
CXCL12-204ENST00000395793 OR1D2P34982 312 aa19.74■□□□□ 0.75
CXCL12-204ENST00000395793 GRASPQ7Z6J2 395 aaPredicted RBP19.74■□□□□ 0.75
CXCL12-204ENST00000395793 KCTD17Q8N5Z5 321 aa19.74■□□□□ 0.75
CXCL12-204ENST00000395793 ACAP3Q96P50 834 aa19.74■□□□□ 0.75
CXCL12-204ENST00000395793 TCHPQ9BT92 498 aa19.74■□□□□ 0.75
CXCL12-204ENST00000395793 ANKFY1Q9P2R3 1169 aa19.74■□□□□ 0.75
CXCL12-204ENST00000395793 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.74■□□□□ 0.75
CXCL12-204ENST00000395793 CDY1Q9Y6F8 540 aa19.74■□□□□ 0.75
CXCL12-204ENST00000395793 PODXLO00592 558 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 CCL16O15467 120 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 TOM1L1O75674 476 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 HNRNPA1P09651 372 aaKnown RBP eCLIP19.73■□□□□ 0.75
CXCL12-204ENST00000395793 LAMP2P13473 410 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 NCKAP1LP55160 1127 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 CUL4AQ13619 759 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 NOLC1Q14978 699 aaKnown RBP eCLIP19.73■□□□□ 0.75
CXCL12-204ENST00000395793 SLC10A6Q3KNW5 377 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 LIN9Q5TKA1 542 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 ASTLQ6HA08 431 aaPredicted RBP19.73■□□□□ 0.75
CXCL12-204ENST00000395793 PDXDC1Q6P996 788 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 SLC44A3Q8N4M1 653 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 SLC7A14Q8TBB6 771 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 REEP2Q9BRK0 252 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 KCND2Q9NZV8 630 aa19.73■□□□□ 0.75
CXCL12-204ENST00000395793 GALR2O43603 387 aaPredicted RBP19.72■□□□□ 0.75
CXCL12-204ENST00000395793 HOXA9P31269 272 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 MCL1Q07820 350 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 STRN3Q13033 797 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 HTR4Q13639 388 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 PPM1LQ5SGD2 360 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 AXDND1Q5T1B0 1012 aaPredicted RBP19.72■□□□□ 0.75
CXCL12-204ENST00000395793 ZPBP2Q6X784 338 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 GPBP1Q86WP2 473 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 FLCNQ8NFG4 579 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 AK8Q96MA6 479 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 HCFC1R1Q9NWW0 138 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 TUBGCP4Q9UGJ1 667 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 BACE2Q9Y5Z0 518 aa19.72■□□□□ 0.75
CXCL12-204ENST00000395793 COL4A3Q01955 1670 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 ANK1P16157 1881 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 KRBA1A5PL33 1030 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 ANHXE9PGG2 379 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 H0Y858 1186 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 PI15O43692 258 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 CFHP08603 1231 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 PLCG1P19174 1290 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 FSHRP23945 695 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 SMTNP53814 917 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 DHX8Q14562 1220 aaKnown RBP19.71■□□□□ 0.75
CXCL12-204ENST00000395793 KARSQ15046 597 aaKnown RBP19.71■□□□□ 0.75
CXCL12-204ENST00000395793 SF3A1Q15459 793 aaKnown RBP19.71■□□□□ 0.75
CXCL12-204ENST00000395793 ANKS3Q6ZW76 656 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 BRAPQ7Z569 592 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 SIX5Q8N196 739 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 KCNN1Q92952 543 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 MFSD1Q9H3U5 465 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 SLC38A7Q9NVC3 462 aa19.71■□□□□ 0.75
CXCL12-204ENST00000395793 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.71■□□□□ 0.75
CXCL12-204ENST00000395793 SLC26A4O43511 780 aa19.7■□□□□ 0.74
CXCL12-204ENST00000395793 TBC1D4O60343 1298 aa19.7■□□□□ 0.74
CXCL12-204ENST00000395793 CXCL8P10145 99 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms