RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 LIMD1Q9UGP4 676 aa12.72□□□□□ -0.37
HLA-DQA1-203ENST00000395363 DMDP11532 3685 aa12.72□□□□□ -0.37
HLA-DQA1-203ENST00000395363 DENND4CQ5VZ89 1909 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 NR1I2O75469 434 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 B3GAT3O94766 335 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 FAM13AO94988 1023 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 MTHFRP42898 656 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 MATR3P43243 847 aaKnown RBP eCLIP12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 VCPP55072 806 aaKnown RBP12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 NCKAP1LP55160 1127 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 PKP1Q13835 747 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 GIT2Q14161 759 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 PTPN21Q16825 1174 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 ZC2HC1CQ53FD0 456 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 TRIM67Q6ZTA4 783 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 DYMQ7RTS9 669 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 TDRD5Q8NAT2 981 aaKnown RBP12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 LNX1Q8TBB1 728 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 RSAD2Q8WXG1 361 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 BICD1Q96G01 975 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 CALML4Q96GE6 196 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 CHAMP1Q96JM3 812 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 FAM84AQ96KN4 292 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 RIPOR3Q96MK2 946 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 FIZ1Q96SL8 496 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 TTPALQ9BTX7 342 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 CCDC94Q9BW85 323 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 FGFBP2Q9BYJ0 223 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 TBC1D7Q9P0N9 293 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 STK24Q9Y6E0 443 aa12.71□□□□□ -0.37
HLA-DQA1-203ENST00000395363 USP34Q70CQ2 3546 aa12.71□□□□□ -0.38
HLA-DQA1-203ENST00000395363 OBSL1O75147 1896 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 PODXLO00592 558 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 PPEF2O14830 753 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 KRT18P05783 430 aaKnown RBP12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 MCF2P10911 925 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 UPP1Q16831 310 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 SLC10A6Q3KNW5 377 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 ATAT1Q5SQI0 421 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 IER5LQ5T953 404 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 ALKAL1Q6UXT8 129 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 HAUS6Q7Z4H7 955 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 PPFIBP1Q86W92 1011 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 MYCT1Q8N699 235 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 ZSWIM2Q8NEG5 633 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 SPIRE2Q8WWL2 714 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 SMG7Q92540 1137 aaKnown RBP12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 LARP4BQ92615 738 aaKnown RBP12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 STAMQ92783 540 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 ASIC4Q96FT7 647 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 MYADMQ96S97 322 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 TFIP11Q9UBB9 837 aaKnown RBP12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 HCN4Q9Y3Q4 1203 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 TICRRQ7Z2Z1 1910 aa12.7□□□□□ -0.38
HLA-DQA1-203ENST00000395363 CLUHO75153 1309 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 CARNS1A5YM72 827 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 MYMKA6NI61 221 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 ANKRD63C9JTQ0 380 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 CCL16O15467 120 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 STX6O43752 255 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 NARSO43776 548 aaKnown RBP12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 LONP1P36776 959 aaKnown RBP12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 YARSP54577 528 aaKnown RBP12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 STRN3Q13033 797 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 LILRA6Q6PI73 481 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 CCDC149Q6ZUS6 474 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 GET4Q7L5D6 327 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 SFR1Q86XK3 245 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 PDILTQ8N807 584 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 PIK3R5Q8WYR1 880 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 PBXIP1Q96AQ6 731 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 AK8Q96MA6 479 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 NECTIN4Q96NY8 510 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 ACAP3Q96P50 834 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 NTPCRQ9BSD7 190 aaKnown RBP12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 HCFC1R1Q9NWW0 138 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 NR2E1Q9Y466 385 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 RBM19Q9Y4C8 960 aaKnown RBP12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 CDY1Q9Y6F8 540 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 CACNA1IQ9P0X4 2223 aa12.69□□□□□ -0.38
HLA-DQA1-203ENST00000395363 NRG2O14511 850 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 HNRNPDLO14979 420 aaKnown RBP12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 FAM189A1O60320 539 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 TBCAO75347 108 aaKnown RBP12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 TOM1L1O75674 476 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 PDCP20941 246 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 FGFR3P22607 806 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 GBP2P32456 591 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 OR1D2P34982 312 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 ZNF131P52739 623 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 SMTNP53814 917 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 ARPP19P56211 112 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 MCL1Q07820 350 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 KCNA1Q09470 495 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 XKR4Q5GH76 650 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 GLIS3Q8NEA6 775 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 SLC7A14Q8TBB6 771 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
HLA-DQA1-203ENST00000395363 PHOX2BQ99453 314 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms