RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 CCSAPQ6IQ19 270 aaPredicted RBP15.27■□□□□ 0.04
CDC42SE2-202ENST00000395246 ACAD10Q6JQN1 1059 aa15.27■□□□□ 0.04
CDC42SE2-202ENST00000395246 PKNOX2Q96KN3 472 aa15.27■□□□□ 0.04
CDC42SE2-202ENST00000395246 FAM213AQ9BRX8 229 aa15.27■□□□□ 0.04
CDC42SE2-202ENST00000395246 TARS2Q9BW92 718 aaKnown RBP15.27■□□□□ 0.04
CDC42SE2-202ENST00000395246 DEF6Q9H4E7 631 aa15.27■□□□□ 0.04
CDC42SE2-202ENST00000395246 NOP56O00567 594 aaKnown RBP15.27■□□□□ 0.03
CDC42SE2-202ENST00000395246 INCA1Q0VD86 236 aa15.27■□□□□ 0.03
CDC42SE2-202ENST00000395246 TCERG1LQ5VWI1 586 aa15.27■□□□□ 0.03
CDC42SE2-202ENST00000395246 MON1BQ7L1V2 547 aa15.27■□□□□ 0.03
CDC42SE2-202ENST00000395246 MAEAQ7L5Y9 396 aa15.27■□□□□ 0.03
CDC42SE2-202ENST00000395246 MSTO1Q9BUK6 570 aa15.27■□□□□ 0.03
CDC42SE2-202ENST00000395246 CDT1Q9H211 546 aa15.27■□□□□ 0.03
CDC42SE2-202ENST00000395246 VIPAS39Q9H9C1 493 aa15.27■□□□□ 0.03
CDC42SE2-202ENST00000395246 TSPAN1O60635 241 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 HLA-DRAP01903 254 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 ELF2Q15723 593 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 DCAF4L1Q3SXM0 396 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 ATF7IP2Q5U623 682 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 TRIM11Q96F44 468 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 MMS19Q96T76 1030 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 LHX5Q9H2C1 402 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 MINDY3Q9H8M7 445 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 COG5Q9UP83 839 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 H3BRB1 525 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 INPPL1O15357 1258 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 CA12O43570 354 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 LRRN2O75325 713 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 PALMO75781 387 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 KIF4AO95239 1232 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 CTGFP29279 349 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 RGS2P41220 211 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 ASPAP45381 313 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 FAM193AP78312 1265 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 PPP1R15BQ5SWA1 713 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 AFG1LQ8WV93 481 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 ZNF592Q92610 1267 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 TUT1Q9H6E5 874 aaKnown RBP15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 CLDN3O15551 220 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 MCM3P25205 808 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 PEX5P50542 639 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 CYP1B1Q16678 543 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 ZBTB41Q5SVQ8 909 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 CREBRFQ8IUR6 639 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 ZBTB45Q96K62 511 aaPredicted RBP15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 CARD9Q9H257 536 aa15.26■□□□□ 0.03
CDC42SE2-202ENST00000395246 CTAGE15A4D2H0 777 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 CTAGE8P0CG41 777 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 GRIK4Q16099 956 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 SGSM1Q2NKQ1 1148 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 CTAGE6Q86UF2 777 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 CTAGE4Q8IX94 777 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 SLCO2A1Q92959 643 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 GDF3Q9NR23 364 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 SGPL1O95470 568 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 TRIM50Q86XT4 487 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 TTC39CQ8N584 583 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 C12orf50Q8NA57 414 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 CNTN3Q9P232 1028 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 IVNS1ABPQ9Y6Y0 642 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 MIF4GDA9UHW6 222 aaKnown RBP15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 PAEPP09466 180 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 HOXA11P31270 313 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 PTPN7P35236 360 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 GABRB2P47870 512 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 GPC5P78333 572 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 MAP2K1Q02750 393 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 BEND6Q5SZJ8 279 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 PALB2Q86YC2 1186 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 NIPA2Q8N8Q9 360 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 UBXN4Q92575 508 aa15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 TOPORSQ9NS56 1045 aaPredicted RBP15.25■□□□□ 0.03
CDC42SE2-202ENST00000395246 CPT1AP50416 773 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 NNTQ13423 1086 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 TDRD12Q587J7 1177 aaKnown RBP15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 MAP3K21Q5TCX8 1036 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 CC2D1AQ6P1N0 951 aaPredicted RBP15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 POP1Q99575 1024 aaKnown RBP15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 CYP3A43Q9HB55 503 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 DOCK3Q8IZD9 2030 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 CTNNA1P35221 906 aaKnown RBP15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 CLCN6P51797 869 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 NAA30Q147X3 362 aaPredicted RBP15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 PLEKHA7Q6IQ23 1121 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 GLYCTKQ8IVS8 523 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 RNF149Q8NC42 400 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 KLHDC9Q8NEP7 349 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 SLC35G2Q8TBE7 412 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 KAT5Q92993 513 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 TATDN2Q93075 761 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 PARD6BQ9BYG5 372 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 SIX4Q9UIU6 781 aa15.24■□□□□ 0.03
CDC42SE2-202ENST00000395246 LRRIQ4A6NIV6 560 aa15.23■□□□□ 0.03
CDC42SE2-202ENST00000395246 ZEB2O60315 1214 aa15.23■□□□□ 0.03
CDC42SE2-202ENST00000395246 DUSP11O75319 330 aaKnown RBP15.23■□□□□ 0.03
CDC42SE2-202ENST00000395246 WEE2P0C1S8 567 aa15.23■□□□□ 0.03
CDC42SE2-202ENST00000395246 FAM26DQ5JW98 314 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms