RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ANAPC7Q9UJX3 599 aa10.71□□□□□ -0.69
UBE2D3-208ENST00000394803 ZBTB39O15060 712 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 LUC7L3O95232 432 aaKnown RBP10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 ARP10275 920 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 ALDH3A1P30838 453 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 RASSF2P50749 326 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 HSD17B4P51659 736 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 ITGA8P53708 1063 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 CACNB3P54284 484 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 SPDYAQ5MJ70 313 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 C1orf220Q5T0J3 134 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 SLC47A2Q86VL8 602 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 C4orf19Q8IY42 314 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 MAB21L3Q8N8X9 362 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 RDM1Q8NG50 284 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 UHMK1Q8TAS1 419 aaKnown RBP10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 KREMEN1Q96MU8 473 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 DCLK3Q9C098 648 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 KIAA1586Q9HCI6 787 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 C1orf112Q9NSG2 853 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 ABCF3Q9NUQ8 709 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 FGFR1OP2Q9NVK5 253 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 WRAP73Q9P2S5 460 aaPredicted RBP10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 CEP83Q9Y592 693 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 CD2APQ9Y5K6 639 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 GSTTP1A0A1W2PQM5 241 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 KCNJ1P48048 391 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 DMP1Q13316 513 aaPredicted RBP10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 MTFR1Q15390 333 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 SMYD5Q6GMV2 418 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 VSTM1Q6UX27 236 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 MAP4K3Q8IVH8 894 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 RHOT1Q8IXI2 618 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 ZDHHC14Q8IZN3 488 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 PARD3BQ8TEW8 1205 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 VCPIP1Q96JH7 1222 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 ARHGEF3Q9NR81 526 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 SMG5Q9UPR3 1016 aaKnown RBP10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 C15orf41Q9Y2V0 281 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 PCDHB2Q9Y5E7 798 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 SCINQ9Y6U3 715 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 ZHX2Q9Y6X8 837 aa10.7□□□□□ -0.7
UBE2D3-208ENST00000394803 A0A1W2PRG0 241 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 ANKRD63C9JTQ0 380 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 ATP2A1O14983 1001 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 ECE2O60344 883 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 HNRNPCL1O60812 293 aaKnown RBP10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 DCTN3O75935 186 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 KRT5P13647 590 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 YWHABP31946 246 aaKnown RBP10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 NSFP46459 744 aaKnown RBP10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 PSMC5P62195 406 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 PPARDQ03181 441 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 PCNX4Q63HM2 1172 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 TLDC1Q6P9B6 456 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 LDHDQ86WU2 507 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 SPICE1Q8N0Z3 855 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 ANKRD42Q8N9B4 389 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 MGARPQ8TDB4 240 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 HELQQ8TDG4 1101 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 C1orf54Q8WWF1 131 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 MFSD14AQ96MC6 490 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 KCNH7Q9NS40 1196 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 NINJ2Q9NZG7 142 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 PRKAG3Q9UGI9 489 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 TBX20Q9UMR3 447 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 TCRBV7S2A1N4TA0A589 114 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 FAM47DPA6NHR8 397 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 E7ENQ6 273 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 ATMINO43313 823 aaPredicted RBP10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 PROSCO94903 275 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 CCNB1P14635 433 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 GARTP22102 1010 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 PEX3P56589 373 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 KRT76Q01546 638 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 GHRHRQ02643 423 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 SHROOM1Q2M3G4 852 aaPredicted RBP10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 PARP6Q2NL67 630 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 CCDC38Q502W7 563 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 WDR44Q5JSH3 913 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 OTUD6AQ7L8S5 288 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 TDRPQ86YL5 185 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 KATNAL2Q8IYT4 538 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 MCOLN2Q8IZK6 566 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 AGGF1Q8N302 714 aaeCLIP10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 SUPT20HQ8NEM7 779 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 SPIRE2Q8WWL2 714 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 MIEF2Q96C03 454 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 TBC1D31Q96DN5 1066 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 DDX23Q9BUQ8 820 aaKnown RBP10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 PITPNM3Q9BZ71 974 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 AAASQ9NRG9 546 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 SUFUQ9UMX1 484 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 RPL26L1Q9UNX3 145 aaKnown RBP10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 STARD13Q9Y3M8 1113 aa10.69□□□□□ -0.7
UBE2D3-208ENST00000394803 IGF2BP3O00425 579 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 LIN7AO14910 233 aaPredicted RBP10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 ICAM1P05362 532 aa10.68□□□□□ -0.7
UBE2D3-208ENST00000394803 IVDP26440 423 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms