RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 ARSHQ5FYA8 562 aa20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 ARL6IP4Q66PJ3 421 aaKnown RBP20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 CWF19L1Q69YN2 538 aaKnown RBP20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 SPIRE2Q8WWL2 714 aa20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 STAMQ92783 540 aa20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 SNX27Q96L92 541 aa20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 PIDD1Q9HB75 910 aa20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 DAXXQ9UER7 740 aaPredicted RBP20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 WDR87Q6ZQQ6 2873 aa20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 PLA2G4BP0C869 781 aa20■□□□□ 0.79
PDLIM7-205ENST00000393551 MAPTP10636 758 aaKnown RBP20■□□□□ 0.79
PDLIM7-205ENST00000393551 MCF2P10911 925 aa20■□□□□ 0.79
PDLIM7-205ENST00000393551 PLS3P13797 630 aa20■□□□□ 0.79
PDLIM7-205ENST00000393551 TKTP29401 623 aaKnown RBP20■□□□□ 0.79
PDLIM7-205ENST00000393551 CACNB1Q02641 598 aaPredicted RBP20■□□□□ 0.79
PDLIM7-205ENST00000393551 RAB33AQ14088 237 aa20■□□□□ 0.79
PDLIM7-205ENST00000393551 MPZL3Q6UWV2 235 aa20■□□□□ 0.79
PDLIM7-205ENST00000393551 TMEM130Q8N3G9 435 aa20■□□□□ 0.79
PDLIM7-205ENST00000393551 ST13P5Q8NFI4 369 aaPredicted RBP20■□□□□ 0.79
PDLIM7-205ENST00000393551 DDX27Q96GQ7 796 aaKnown RBP20■□□□□ 0.79
PDLIM7-205ENST00000393551 TIPINQ9BVW5 301 aa20■□□□□ 0.79
PDLIM7-205ENST00000393551 CCDC94Q9BW85 323 aaPredicted RBP20■□□□□ 0.79
PDLIM7-205ENST00000393551 HAPLN2Q9GZV7 340 aa20■□□□□ 0.79
PDLIM7-205ENST00000393551 FAM86C1Q9NVL1 165 aa20■□□□□ 0.79
PDLIM7-205ENST00000393551 MTRRQ9UBK8 725 aa20■□□□□ 0.79
PDLIM7-205ENST00000393551 C8AP07357 584 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 LAMP2P13473 410 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 KCNE1P15382 129 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 OR1D2P34982 312 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 NTHL1P78549 312 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 GRIN1Q05586 938 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 SEZ6Q53EL9 994 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 ASTLQ6HA08 431 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 GET4Q7L5D6 327 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 APBB1IPQ7Z5R6 666 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 GRASPQ7Z6J2 395 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 SLC44A3Q8N4M1 653 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 KCTD17Q8N5Z5 321 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 UROC1Q96N76 676 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 ACAP3Q96P50 834 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 CNTN3Q9P232 1028 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 SMC3Q9UQE7 1217 aa19.99■□□□□ 0.79
PDLIM7-205ENST00000393551 ANHXE9PGG2 379 aa19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 H0Y858 1186 aa19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 GALR2O43603 387 aaPredicted RBP19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 PI15O43692 258 aa19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 MCM2P49736 904 aa19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 YARSP54577 528 aaKnown RBP19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 SLC10A6Q3KNW5 377 aa19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 LARP1BQ659C4 914 aaKnown RBP19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 PDXDC1Q6P996 788 aa19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 C18orf25Q96B23 403 aaPredicted RBP19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 TCHPQ9BT92 498 aa19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 TOPORSQ9NS56 1045 aaPredicted RBP19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 CDY1Q9Y6F8 540 aa19.98■□□□□ 0.79
PDLIM7-205ENST00000393551 CCL16O15467 120 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 TOM1L1O75674 476 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 HNRNPA1P09651 372 aaKnown RBP eCLIP19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 HARSP12081 509 aaKnown RBP19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 CLCN5P51795 746 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 NUBP1P53384 320 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 HTR4Q13639 388 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 PPM1LQ5SGD2 360 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 AXDND1Q5T1B0 1012 aaPredicted RBP19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 SLC7A14Q8TBB6 771 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 RPP25Q9BUL9 199 aaKnown RBP19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 BLOC1S4Q9NUP1 217 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 KCND2Q9NZV8 630 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 ANKFY1Q9P2R3 1169 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 BACE2Q9Y5Z0 518 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 MYH15Q9Y2K3 1946 aa19.97■□□□□ 0.79
PDLIM7-205ENST00000393551 KRBA1A5PL33 1030 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 PODXLO00592 558 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 TBC1D4O60343 1298 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 CFHP08603 1231 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 FSHRP23945 695 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 HOXA9P31269 272 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 NCKAP1LP55160 1127 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 LIN9Q5TKA1 542 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 SIX5Q8N196 739 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 FLCNQ8NFG4 579 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 KCNN1Q92952 543 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 AK8Q96MA6 479 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 REEP2Q9BRK0 252 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 MFSD1Q9H3U5 465 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 UPF2Q9HAU5 1272 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 SLC38A7Q9NVC3 462 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 HCFC1R1Q9NWW0 138 aa19.96■□□□□ 0.79
PDLIM7-205ENST00000393551 SMTNP53814 917 aa19.95■□□□□ 0.78
PDLIM7-205ENST00000393551 MCL1Q07820 350 aa19.95■□□□□ 0.78
PDLIM7-205ENST00000393551 STRN3Q13033 797 aa19.95■□□□□ 0.78
PDLIM7-205ENST00000393551 NOLC1Q14978 699 aaKnown RBP eCLIP19.95■□□□□ 0.78
PDLIM7-205ENST00000393551 POTEHQ6S545 545 aa19.95■□□□□ 0.78
PDLIM7-205ENST00000393551 ZPBP2Q6X784 338 aa19.95■□□□□ 0.78
PDLIM7-205ENST00000393551 ANKS3Q6ZW76 656 aa19.95■□□□□ 0.78
PDLIM7-205ENST00000393551 FGF14Q92915 247 aa19.95■□□□□ 0.78
PDLIM7-205ENST00000393551 CDK5RAP3Q96JB5 506 aa19.95■□□□□ 0.78
PDLIM7-205ENST00000393551 WNT16Q9UBV4 365 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms