RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 A0A087WUV0 522 aaPredicted RBP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 MOCS2O96007 188 aaPredicted RBP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 MMEP08473 750 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 PDGFRBP09619 1106 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 GTF2H1P32780 548 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 KLHL38Q2WGJ6 581 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 EPC2Q52LR7 807 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 FAM133BQ5BKY9 247 aaKnown RBP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 ZBED8Q8IZ13 594 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 PNMA5Q96PV4 448 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 DDX23Q9BUQ8 820 aaKnown RBP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 GAS2O43903 313 aaKnown RBP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 NAMPTP43490 491 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 SREBF2Q12772 1141 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 NIF3L1Q9GZT8 377 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 FBXL5Q9UKA1 691 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 CD4P01730 458 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 PAMP19021 973 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 GRIK1P39086 918 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 MAGOHP61326 146 aaKnown RBP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 TMEM119Q4V9L6 283 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 ZC3H18Q86VM9 953 aaKnown RBP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 PRPF31Q8WWY3 499 aaKnown RBP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 UBN1Q9NPG3 1134 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 FIS1Q9Y3D6 152 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 CLTAP09496 248 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 CDKAL1Q5VV42 579 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 BTBD8Q5XKL5 378 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 CDR2LQ86X02 465 aaPredicted RBP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 CBWD2Q8IUF1 395 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 SPATA2LQ8IUW3 424 aaPredicted RBP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 VCX3BQ9H321 246 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 ANGPTL3Q9Y5C1 460 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 KRT37O76014 449 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 BIRC2Q13490 618 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 MMEL1Q495T6 779 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 TRIM65Q6PJ69 517 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 C4orf19Q8IY42 314 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 KIAA0895Q8NCT3 520 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 FZD1Q9UP38 647 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 ITGA4P13612 1032 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 PDCLQ13371 301 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 ZNF720Q7Z2F6 126 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 PLEKHH3Q7Z736 793 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 ZNF677Q86XU0 584 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 ELMOD1Q8N336 334 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 PGBD4Q96DM1 585 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 CBWD1Q9BRT8 395 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 TRIM51Q9BSJ1 452 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 DONSONQ9NYP3 566 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 WDR35Q9P2L0 1181 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 NOL3O60936 208 aaKnown RBP17.54■□□□□ 0.4
SCN3B-202ENST00000392770 ZFXP17010 805 aaPredicted RBP17.54■□□□□ 0.4
SCN3B-202ENST00000392770 BRD2P25440 801 aaKnown RBP17.54■□□□□ 0.4
SCN3B-202ENST00000392770 EIF3EP60228 445 aaKnown RBP17.54■□□□□ 0.4
SCN3B-202ENST00000392770 REXO1L1PQ8IX06 675 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 DBR1Q9UK59 544 aaKnown RBP17.54■□□□□ 0.4
SCN3B-202ENST00000392770 BNIP3LO60238 219 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 KLRC1P26715 233 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 NLRP11P59045 1033 aaKnown RBP17.54■□□□□ 0.4
SCN3B-202ENST00000392770 DMTNQ08495 405 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 TACO1Q9BSH4 297 aaKnown RBP17.54■□□□□ 0.4
SCN3B-202ENST00000392770 RBM12Q9NTZ6 932 aaKnown RBP17.54■□□□□ 0.4
SCN3B-202ENST00000392770 TTI1O43156 1089 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 GPC4O75487 556 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 COMTP21964 271 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 SARSP49591 514 aaKnown RBP17.54■□□□□ 0.4
SCN3B-202ENST00000392770 GPAT2Q6NUI2 795 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 EPM2AIP1Q7L775 607 aaPredicted RBP17.54■□□□□ 0.4
SCN3B-202ENST00000392770 TTC1Q99614 292 aa17.54■□□□□ 0.4
SCN3B-202ENST00000392770 C17orf102A2RUQ5 167 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 KRT10P13645 584 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 FGFR4P22455 802 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 EVX2Q03828 476 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 NCAPHQ15003 741 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 NT5DC1Q5TFE4 455 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 NOTUMQ6P988 496 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 GPC2Q8N158 579 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 DNERQ8NFT8 737 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 COPEO14579 308 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 ITGB3P05106 788 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 PMLP29590 882 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 TSTA3Q13630 321 aaPredicted RBP17.53■□□□□ 0.4
SCN3B-202ENST00000392770 GOLGA7BQ2TAP0 167 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 SV2CQ496J9 727 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 NYAP1Q6ZVC0 841 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 ATL2Q8NHH9 583 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 SLC5A5Q92911 643 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 RANBP17Q9H2T7 1088 aaKnown RBP17.53■□□□□ 0.4
SCN3B-202ENST00000392770 FAM208AQ9UK61 1670 aaKnown RBP17.53■□□□□ 0.4
SCN3B-202ENST00000392770 KBTBD13C9JR72 458 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 CUL2Q13617 745 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 PIGHQ14442 188 aaPredicted RBP17.53■□□□□ 0.4
SCN3B-202ENST00000392770 ZNF484Q5JVG2 852 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 NT5C1AQ9BXI3 368 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 ADM5C9JUS6 153 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 TXNDC9O14530 226 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 PDGFRAP16234 1089 aa17.53■□□□□ 0.4
SCN3B-202ENST00000392770 GUCY2CP25092 1073 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms