RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 LAMA4Q16363 1823 aa13.68□□□□□ -0.22
ERCC2-204ENST00000391945 RCCD1A6NED2 376 aa13.68□□□□□ -0.22
ERCC2-204ENST00000391945 ASAP2O43150 1006 aa13.68□□□□□ -0.22
ERCC2-204ENST00000391945 KCNA2P16389 499 aa13.68□□□□□ -0.22
ERCC2-204ENST00000391945 PSMA2P25787 234 aa13.68□□□□□ -0.22
ERCC2-204ENST00000391945 REPS2Q8NFH8 660 aa13.68□□□□□ -0.22
ERCC2-204ENST00000391945 RSAD2Q8WXG1 361 aa13.68□□□□□ -0.22
ERCC2-204ENST00000391945 ZRANB2O95218 330 aaKnown RBP eCLIP13.67□□□□□ -0.224e-8■■■■□ 20.3
ERCC2-204ENST00000391945 ADRB2P07550 413 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 GLRA2P23416 452 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 DR1Q01658 176 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 TAF12Q16514 161 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 BSPRYQ5W0U4 402 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 OTUD6BQ8N6M0 293 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 BTBD6Q96KE9 485 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 RBM12Q9NTZ6 932 aaKnown RBP13.67□□□□□ -0.22
ERCC2-204ENST00000391945 TTLL3Q9Y4R7 772 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 PCDHB2Q9Y5E7 798 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 E7EVH7 732 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 CALCAP01258 141 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 CDK17Q00537 523 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 RNPC3Q96LT9 517 aaKnown RBP13.67□□□□□ -0.22
ERCC2-204ENST00000391945 KLHL11Q9NVR0 708 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 ZNF446Q9NWS9 450 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 KLK14Q9P0G3 267 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 HGSO14964 777 aaPredicted RBP13.67□□□□□ -0.22
ERCC2-204ENST00000391945 NKRFO15226 690 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■□□□□ 10.8
ERCC2-204ENST00000391945 ARHGAP25P42331 645 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 PSMC1P62191 440 aaKnown RBP13.67□□□□□ -0.22
ERCC2-204ENST00000391945 GTF2BQ00403 316 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 DENND2CQ68D51 928 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 BEST2Q8NFU1 509 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 BAP1Q92560 729 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 ZBTB10Q96DT7 871 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 FAM193BQ96PV7 902 aaPredicted RBP13.67□□□□□ -0.22
ERCC2-204ENST00000391945 CAPS2Q9BXY5 557 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 RNF19AQ9NV58 838 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 AIPL1Q9NZN9 384 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 ALG6Q9Y672 507 aa13.67□□□□□ -0.22
ERCC2-204ENST00000391945 MIF4GDA9UHW6 222 aaKnown RBP13.66□□□□□ -0.22
ERCC2-204ENST00000391945 STRNO43815 780 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 ADCY3O60266 1144 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 ITGB3P05106 788 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 MAPTP10636 758 aaKnown RBP13.66□□□□□ -0.22
ERCC2-204ENST00000391945 RNASELQ05823 741 aaKnown RBP13.66□□□□□ -0.22
ERCC2-204ENST00000391945 DHX9Q08211 1270 aaKnown RBP13.66□□□□□ -0.22
ERCC2-204ENST00000391945 TMEM132DQ14C87 1099 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 SGSM1Q2NKQ1 1148 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 DSTYKQ6XUX3 929 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■□□ 16.7
ERCC2-204ENST00000391945 SCINQ9Y6U3 715 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 PASKQ96RG2 1323 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 GTPBP10A4D1E9 387 aaKnown RBP13.66□□□□□ -0.22
ERCC2-204ENST00000391945 GTF2H1P32780 548 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 CCT5P48643 541 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 PLCB4Q15147 1175 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 CELF3Q5SZQ8 465 aaKnown RBP13.66□□□□□ -0.22
ERCC2-204ENST00000391945 RFX6Q8HWS3 928 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 EXOC4Q96A65 974 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 MIS12Q9H081 205 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 CXCL8P10145 99 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 ATF2P15336 505 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 ZCWPW2Q504Y3 356 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 COBLL1Q53SF7 1204 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 ABHD15Q6UXT9 468 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 BSNDQ8WZ55 320 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 C12orf42Q96LP6 360 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 OSMRQ99650 979 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 FUT8Q9BYC5 575 aa13.66□□□□□ -0.22
ERCC2-204ENST00000391945 SOWAHBA6NEL2 793 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 LRRIQ3A6PVS8 624 aaPredicted RBP13.65□□□□□ -0.22
ERCC2-204ENST00000391945 A8MXQ7 604 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 BTBD19C9JJ37 291 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 PI4K2BG5E9Z4 385 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 NPTXRO95502 500 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 ECEL1O95672 775 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 CYP11B1P15538 503 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 BRD2P25440 801 aaKnown RBP13.65□□□□□ -0.22
ERCC2-204ENST00000391945 MYL6P60660 151 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 MYBPC2Q14324 1141 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 ABI1Q8IZP0 508 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 HSPH1Q92598 858 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 LRRC4Q9HBW1 653 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 SGK1O00141 431 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 DDX3XO00571 662 aaKnown RBP eCLIP13.65□□□□□ -0.22
ERCC2-204ENST00000391945 FARP2O94887 1054 aaPredicted RBP13.65□□□□□ -0.22
ERCC2-204ENST00000391945 TMEM253P0C7T8 217 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 YBX3P16989 372 aaKnown RBP eCLIP13.65□□□□□ -0.227e-8■□□□□ 8.2
ERCC2-204ENST00000391945 AP3M2P53677 418 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 CUL2Q13617 745 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 SPOUT1Q5T280 376 aaKnown RBP13.65□□□□□ -0.22
ERCC2-204ENST00000391945 ABHD16BQ9H3Z7 469 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 H7C0C1 242 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 CCDC188H7C350 402 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 GAS2O43903 313 aaKnown RBP13.65□□□□□ -0.22
ERCC2-204ENST00000391945 PDGFRBP09619 1106 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 COMTP21964 271 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 ADORA2BP29275 332 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 ATP5OP48047 213 aa13.65□□□□□ -0.22
ERCC2-204ENST00000391945 IRX5P78411 483 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms