RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CUL3Q13618 768 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 C3orf67Q6ZVT6 689 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 PSMC3IPQ9P2W1 217 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 MCM8Q9UJA3 840 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 ZBED1O96006 694 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 ALDH1B1P30837 517 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 VHLP40337 213 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 QARSP47897 775 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 HGSNATQ68CP4 663 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 TUFT1Q9NNX1 390 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 CNOT7Q9UIV1 285 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 H3BRJ5 948 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 PPIP5K2O43314 1243 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 C3orf62Q6ZUJ4 267 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 MTDHQ86UE4 582 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 NME8Q8N427 588 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 EIF1ADQ8N9N8 165 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 TMEM35BQ8NCS4 154 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 DEPDC1BQ8WUY9 529 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 SLC7A3Q8WY07 619 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 LRGUKQ96M69 825 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 ANLNQ9NQW6 1124 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 PAPOLBQ9NRJ5 636 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 HEY2Q9UBP5 337 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 K7ERI5 159 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 CRKP46108 304 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 YARSP54577 528 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 EPHA7Q15375 998 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 TAF1BQ53T94 588 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 NLRP7Q8WX94 980 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 ACSF2Q96CM8 615 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 MSTO1Q9BUK6 570 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 TAS2R14Q9NYV8 317 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 GTF3C4Q9UKN8 822 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 SRRM3A6NNA2 597 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 F5H423 210 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 ADAMTS3O15072 1205 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 MSH4O15457 936 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 RARAP10276 462 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 SLC1A1P43005 524 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 MTMR1Q13613 665 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 KIF22Q14807 665 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 MMEL1Q495T6 779 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 TMCO4Q5TGY1 634 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 RPS6KC1Q96S38 1066 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 POP1Q99575 1024 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 COA1Q9GZY4 146 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 RANBP17Q9H2T7 1088 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 TBX3O15119 743 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 CBX6O95503 412 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 SETSIPP0DME0 302 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 CNGA2Q16280 664 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 SNRNP35Q16560 246 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 TMEM119Q4V9L6 283 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 ARHGEF1Q92888 912 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 ACAP3Q96P50 834 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 MTMR9Q96QG7 549 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 TDRD3Q9H7E2 651 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 NGRNQ9NPE2 291 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 SLC9A2Q9UBY0 812 aa13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-201ENST00000389328 KRT38O76015 456 aa13.9□□□□□ -0.19
TRAPPC9-201ENST00000389328 EPHB2P29323 1055 aa13.9□□□□□ -0.19
TRAPPC9-201ENST00000389328 PPP6R3Q5H9R7 873 aaPredicted RBP13.9□□□□□ -0.19
TRAPPC9-201ENST00000389328 OR6B2Q6IFH4 312 aa13.9□□□□□ -0.19
TRAPPC9-201ENST00000389328 TRIM50Q86XT4 487 aa13.9□□□□□ -0.19
TRAPPC9-201ENST00000389328 LARGE2Q8N3Y3 721 aa13.9□□□□□ -0.19
TRAPPC9-201ENST00000389328 SLC5A5Q92911 643 aa13.9□□□□□ -0.19
TRAPPC9-201ENST00000389328 ELMO3Q96BJ8 720 aa13.9□□□□□ -0.19
TRAPPC9-201ENST00000389328 GANQ9H2C0 597 aa13.9□□□□□ -0.19
TRAPPC9-201ENST00000389328 IP6K2Q9UHH9 426 aa13.9□□□□□ -0.19
TRAPPC9-201ENST00000389328 FIS1Q9Y3D6 152 aa13.9□□□□□ -0.19
TRAPPC9-201ENST00000389328 PEAK1Q9H792 1746 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 EIF3DO15371 548 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 NDUFB10O96000 172 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 MTBPQ96DY7 904 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 CHMP2BQ9UQN3 213 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 RFC1P35251 1148 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 AUHQ13825 339 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 CC2D2BQ6DHV5 1058 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 INTS5Q6P9B9 1019 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 RAPH1Q70E73 1250 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 TRIML2Q8N7C3 387 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 DNAJC19Q96DA6 116 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 NSL1Q96IY1 281 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 TRIM56Q9BRZ2 755 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 RIOX1Q9H6W3 641 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 KIAA0391O15091 583 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 PRPSAP2O60256 369 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 HNRNPCL1O60812 293 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 TTLL12Q14166 644 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 ZBTB8OSQ8IWT0 167 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 CBWD1Q9BRT8 395 aa13.89□□□□□ -0.19
TRAPPC9-201ENST00000389328 KRT10P13645 584 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 MARCKSL1P49006 195 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 SLC12A2P55011 1212 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 PPP4CP60510 307 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 NPY5RQ15761 445 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 KRT80Q6KB66 452 aa13.88□□□□□ -0.19
TRAPPC9-201ENST00000389328 CCNYQ8ND76 341 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms