RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.08■■□□□ 1.29
CBWD3-202ENST00000377342 LRRC10BA6NIK2 292 aa23.07■■□□□ 1.28
CBWD3-202ENST00000377342 AMHP03971 560 aa23.07■■□□□ 1.28
CBWD3-202ENST00000377342 PRKCSHP14314 528 aaPredicted RBP23.07■■□□□ 1.28
CBWD3-202ENST00000377342 SCNN1GP51170 649 aa23.07■■□□□ 1.28
CBWD3-202ENST00000377342 FANCCQ00597 558 aa23.07■■□□□ 1.28
CBWD3-202ENST00000377342 SURF1Q15526 300 aa23.07■■□□□ 1.28
CBWD3-202ENST00000377342 HELQQ8TDG4 1101 aa23.07■■□□□ 1.28
CBWD3-202ENST00000377342 UBN1Q9NPG3 1134 aa23.07■■□□□ 1.28
CBWD3-202ENST00000377342 C2CD2Q9Y426 696 aa23.07■■□□□ 1.28
CBWD3-202ENST00000377342 KIAA1671Q9BY89 1806 aa23.07■■□□□ 1.28
CBWD3-202ENST00000377342 GBF1Q92538 1859 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 SMIM28A0A1B0GU29 152 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 CAPN15O75808 1086 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 NAB2Q15742 525 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 ZBTB6Q15916 424 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 CBWD6Q4V339 395 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 CBWD3Q5JTY5 395 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 CBWD5Q5RIA9 395 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 RASIP1Q5U651 963 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 C15orf39Q6ZRI6 1047 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 TOP1MTQ969P6 601 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 PPP1R10Q96QC0 940 aaKnown RBP23.06■■□□□ 1.28
CBWD3-202ENST00000377342 MTMR12Q9C0I1 747 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 VPS16Q9H269 839 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 RC3H2Q9HBD1 1191 aaKnown RBP23.06■■□□□ 1.28
CBWD3-202ENST00000377342 INTS13Q9NVM9 706 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 ZBBXA8MT70 800 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 H0YGN5 161 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 TNNI1P19237 187 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 GCLMP48507 274 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 KCNH2Q12809 1159 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 TMEM132DQ14C87 1099 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 VWA3BQ502W6 1294 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 SCARA3Q6AZY7 606 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 GLB1LQ6UWU2 654 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 KIF12Q96FN5 646 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 TMEM117Q9H0C3 514 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 MMRN2Q9H8L6 949 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 TUBGCP4Q9UGJ1 667 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 LRFN2Q9ULH4 789 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 INPP5FQ9Y2H2 1132 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 DERAQ9Y315 318 aa23.06■■□□□ 1.28
CBWD3-202ENST00000377342 SCN1AP35498 2009 aa23.05■■□□□ 1.28
CBWD3-202ENST00000377342 TULP1O00294 542 aaPredicted RBP23.05■■□□□ 1.28
CBWD3-202ENST00000377342 UPP2O95045 317 aa23.05■■□□□ 1.28
CBWD3-202ENST00000377342 AFPP02771 609 aaKnown RBP23.05■■□□□ 1.28
CBWD3-202ENST00000377342 KCNJ6P48051 423 aa23.05■■□□□ 1.28
CBWD3-202ENST00000377342 FMO5P49326 533 aa23.05■■□□□ 1.28
CBWD3-202ENST00000377342 SOX4Q06945 474 aaPredicted RBP23.05■■□□□ 1.28
CBWD3-202ENST00000377342 UVSSAQ2YD98 709 aa23.05■■□□□ 1.28
CBWD3-202ENST00000377342 C9orf50Q5SZB4 431 aa23.05■■□□□ 1.28
CBWD3-202ENST00000377342 TDRD10Q5VZ19 366 aaKnown RBP23.05■■□□□ 1.28
CBWD3-202ENST00000377342 USP37Q86T82 979 aa23.05■■□□□ 1.28
CBWD3-202ENST00000377342 ANKRD20A12PQ8NF67 263 aa23.05■■□□□ 1.28
CBWD3-202ENST00000377342 C18orf25Q96B23 403 aaPredicted RBP23.05■■□□□ 1.28
CBWD3-202ENST00000377342 NAP1L5Q96NT1 182 aaPredicted RBP23.05■■□□□ 1.28
CBWD3-202ENST00000377342 CASD1Q96PB1 797 aa23.05■■□□□ 1.28
CBWD3-202ENST00000377342 RPS6KC1Q96S38 1066 aa23.05■■□□□ 1.28
CBWD3-202ENST00000377342 NDST4Q9H3R1 872 aa23.05■■□□□ 1.28
CBWD3-202ENST00000377342 A0A1B0GTH6 734 aa23.04■■□□□ 1.28
CBWD3-202ENST00000377342 LGALS16A8MUM7 142 aa23.04■■□□□ 1.28
CBWD3-202ENST00000377342 POMCP01189 267 aa23.04■■□□□ 1.28
CBWD3-202ENST00000377342 GUCY2FP51841 1108 aa23.04■■□□□ 1.28
CBWD3-202ENST00000377342 TFAMQ00059 246 aaKnown RBP23.04■■□□□ 1.28
CBWD3-202ENST00000377342 SARM1Q6SZW1 724 aa23.04■■□□□ 1.28
CBWD3-202ENST00000377342 NT5DC4Q86YG4 428 aa23.04■■□□□ 1.28
CBWD3-202ENST00000377342 CXorf38Q8TB03 319 aa23.04■■□□□ 1.28
CBWD3-202ENST00000377342 GDF15Q99988 308 aa23.04■■□□□ 1.28
CBWD3-202ENST00000377342 TMEM8AQ9HCN3 771 aa23.04■■□□□ 1.28
CBWD3-202ENST00000377342 GOLGA6L3A6NEY3 463 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 B4GALT3O60512 393 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 DGKIO75912 1065 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 C4BPAP04003 597 aaKnown RBP23.03■■□□□ 1.28
CBWD3-202ENST00000377342 GTF2H1P32780 548 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 MXI1P50539 228 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 ZACNQ401N2 412 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 NOMO2Q5JPE7 1267 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 SV2AQ7L0J3 742 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 HOXA2O43364 376 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 SERPINC1P01008 464 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 MYL7Q01449 175 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 GRIK3Q13003 919 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 GSE1Q14687 1217 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 C1orf127Q8N9H9 656 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 TSPAN18Q96SJ8 248 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 GRPEL1Q9HAV7 217 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 GOLGA2P5Q9HBQ8 144 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 RTN4Q9NQC3 1192 aaKnown RBP23.03■■□□□ 1.28
CBWD3-202ENST00000377342 TBC1D13Q9NVG8 400 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 RNF216Q9NWF9 866 aaPredicted RBP23.03■■□□□ 1.28
CBWD3-202ENST00000377342 IFNKQ9P0W0 207 aa23.03■■□□□ 1.28
CBWD3-202ENST00000377342 TMEM191BP0C7N4 346 aa23.02■■□□□ 1.28
CBWD3-202ENST00000377342 DUOXA2Q1HG44 320 aa23.02■■□□□ 1.28
CBWD3-202ENST00000377342 FAM117BQ6P1L5 589 aa23.02■■□□□ 1.28
CBWD3-202ENST00000377342 ZNF689Q96CS4 500 aaPredicted RBP23.02■■□□□ 1.28
CBWD3-202ENST00000377342 HCSTQ9UBK5 93 aa23.02■■□□□ 1.28
CBWD3-202ENST00000377342 CACNG4Q9UBN1 327 aa23.02■■□□□ 1.28
CBWD3-202ENST00000377342 SIX4Q9UIU6 781 aa23.02■■□□□ 1.28
CBWD3-202ENST00000377342 UBQLN1Q9UMX0 589 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms